About lab
One published Lab
Build with this Lab. Run it anywhere.
Use the same immutable release locally or through managed cloud execution, with its exact version and provenance preserved.
Preparing exact examples…
Contains molecular interactions known to be active in rheumatoid arthritis. It can be used to explore systemsbiology wu2010 rheumatoid arthritis map layout dynamics and compare simulation behavior across conditions.
Manifest
{
"io": {
"inputs": [
{
"name": "initial_cell_growth_differentiation_morphogenesis",
"label": "Initial Cell Growth Differentiation Morphogenesis",
"maps_to": "systemsbiology_sbml_wu2010_rheumatoid_arthritis_map_layout_updated_model2302140001_model.initial_cell_growth_differentiation_morphogenesis",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `s422`."
},
{
"name": "initial_wnt_signaling_pathway",
"label": "Initial Wnt Signaling Pathway",
"maps_to": "systemsbiology_sbml_wu2010_rheumatoid_arthritis_map_layout_updated_model2302140001_model.initial_wnt_signaling_pathway",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `s1181`."
},
{
"name": "initial_traf6",
"label": "Initial Traf6",
"maps_to": "systemsbiology_sbml_wu2010_rheumatoid_arthritis_map_layout_updated_model2302140001_model.initial_traf6",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `s360`."
},
{
"name": "initial_traf6_2",
"label": "Initial Traf6 2",
"maps_to": "systemsbiology_sbml_wu2010_rheumatoid_arthritis_map_layout_updated_model2302140001_model.initial_traf6_2",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `s359`."
},
{
"name": "initial_traf6_3",
"label": "Initial Traf6 3",
"maps_to": "systemsbiology_sbml_wu2010_rheumatoid_arthritis_map_layout_updated_model2302140001_model.initial_traf6_3",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `s36`."
},
{
"name": "initial_traf3",
"label": "Initial Traf3",
"maps_to": "systemsbiology_sbml_wu2010_rheumatoid_arthritis_map_layout_updated_model2302140001_model.initial_traf3",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `s180`."
}
],
"outputs": [
{
"name": "state",
"maps_to": "systemsbiology_sbml_wu2010_rheumatoid_arthritis_map_layout_updated_model2302140001_model.state"
},
{
"name": "summary",
"maps_to": "systemsbiology_sbml_wu2010_rheumatoid_arthritis_map_layout_updated_model2302140001_model.summary"
},
{
"name": "species_labels",
"maps_to": "systemsbiology_sbml_wu2010_rheumatoid_arthritis_map_layout_updated_model2302140001_model.species_labels"
},
{
"name": "cell_growth_differentiation_morphogenesis",
"maps_to": "systemsbiology_sbml_wu2010_rheumatoid_arthritis_map_layout_updated_model2302140001_model.cell_growth_differentiation_morphogenesis"
},
{
"name": "wnt_signaling_pathway",
"maps_to": "systemsbiology_sbml_wu2010_rheumatoid_arthritis_map_layout_updated_model2302140001_model.wnt_signaling_pathway"
},
{
"name": "traf6",
"maps_to": "systemsbiology_sbml_wu2010_rheumatoid_arthritis_map_layout_updated_model2302140001_model.traf6"
},
{
"name": "traf6_2",
"maps_to": "systemsbiology_sbml_wu2010_rheumatoid_arthritis_map_layout_updated_model2302140001_model.traf6_2"
},
{
"name": "traf6_3",
"maps_to": "systemsbiology_sbml_wu2010_rheumatoid_arthritis_map_layout_updated_model2302140001_model.traf6_3"
},
{
"name": "traf3",
"maps_to": "systemsbiology_sbml_wu2010_rheumatoid_arthritis_map_layout_updated_model2302140001_model.traf3"
}
]
},
"tags": [
"systemsbiology",
"sbml",
"biomodels_ebi",
"faithful",
"curated"
],
"title": "Wu2010 Rheumatoid Arthritis Map Layout Updated Lab",
"models": [
{
"path": "models/core",
"alias": "systemsbiology_sbml_wu2010_rheumatoid_arthritis_map_layout_updated_model2302140001_model"
},
{
"path": "models/visualisation",
"alias": "visualisation"
}
],
"wiring": [
{
"to": [
"visualisation.systemsbiology_sbml_wu2010_rheumatoid_arthritis_map_layout_updated_model2302140001_model_state"
],
"from": "systemsbiology_sbml_wu2010_rheumatoid_arthritis_map_layout_updated_model2302140001_model.state"
},
{
"to": [
"visualisation.systemsbiology_sbml_wu2010_rheumatoid_arthritis_map_layout_updated_model2302140001_model_summary"
],
"from": "systemsbiology_sbml_wu2010_rheumatoid_arthritis_map_layout_updated_model2302140001_model.summary"
},
{
"to": [
"visualisation.systemsbiology_sbml_wu2010_rheumatoid_arthritis_map_layout_updated_model2302140001_model_species_labels"
],
"from": "systemsbiology_sbml_wu2010_rheumatoid_arthritis_map_layout_updated_model2302140001_model.species_labels"
}
],
"package": "wu2010-rheumatoid-arthritis-map-layout-updated",
"runtime": {
"duration": 1,
"initial_inputs": {},
"communication_step": 0.1
},
"version": "1.0.0",
"description": "Contains molecular interactions known to be active in rheumatoid arthritis. It can be used to explore systemsbiology wu2010 rheumatoid arthritis map layout dynamics and compare simulation behavior across conditions.",
"schema_version": "2.0"
}Runtime
Duration1
Comms Step0.1
Runs
Total0
Completed0
Failed0
Metadata
Packagewu2010-rheumatoid-arthritis-map-layout-updated
Created2026-05-17
Updated2026-06-13
systemsbiologysbmlbiomodels_ebifaithfulcuratedvisualisationother