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Clean Biosimulant lab for systems signaling model: Grigolon2018 - Responses to auxin signals. Values are native SBML quantities; equations, parameters, and initial values remain in the bundled source file.
Manifest
{
"io": {
"inputs": [
{
"name": "initial_sauxin_level",
"label": "Sauxin",
"maps_to": "signaling_sbml_grigolon2018_responses_to_auxin_signals_model2003060002_model.initial_sauxin_level",
"description": "Sauxin source parameter. Maps to SBML symbol `Sauxin` and preserves the bundled default."
},
{
"name": "initial_tauxin_level",
"label": "Tauxin",
"maps_to": "signaling_sbml_grigolon2018_responses_to_auxin_signals_model2003060002_model.initial_tauxin_level",
"description": "Tauxin source parameter. Maps to SBML symbol `Tauxin` and preserves the bundled default."
},
{
"name": "initial_auxin",
"label": "Initial Auxin",
"maps_to": "signaling_sbml_grigolon2018_responses_to_auxin_signals_model2003060002_model.initial_auxin",
"description": "Initial level of Auxin. Maps to SBML symbol `auxin`; exposed as a traceable initial-condition perturbation."
}
],
"outputs": [
{
"name": "auxin",
"label": "Auxin",
"maps_to": "signaling_sbml_grigolon2018_responses_to_auxin_signals_model2003060002_model.auxin",
"description": "Auxin. Maps to SBML symbol `auxin` and is emitted in native SBML units."
},
{
"name": "indole_3_acetic_acid",
"label": "indole-3-acetic acid",
"maps_to": "signaling_sbml_grigolon2018_responses_to_auxin_signals_model2003060002_model.indole_3_acetic_acid",
"description": "indole-3-acetic acid. Maps to SBML symbol `IAA` and is emitted in native SBML units."
},
{
"name": "auxin_response_factor",
"label": "auxin response factor",
"maps_to": "signaling_sbml_grigolon2018_responses_to_auxin_signals_model2003060002_model.auxin_response_factor",
"description": "auxin response factor. Maps to SBML symbol `ARF` and is emitted in native SBML units."
},
{
"name": "state",
"label": "Observable state",
"maps_to": "signaling_sbml_grigolon2018_responses_to_auxin_signals_model2003060002_model.state"
},
{
"name": "summary",
"label": "Simulation summary",
"maps_to": "signaling_sbml_grigolon2018_responses_to_auxin_signals_model2003060002_model.summary"
},
{
"name": "species_labels",
"label": "Observable labels",
"maps_to": "signaling_sbml_grigolon2018_responses_to_auxin_signals_model2003060002_model.species_labels"
}
]
},
"tags": [
"signaling",
"systems",
"systems-biology",
"sbml",
"faithful",
"biomodels_ebi",
"plant-signaling",
"hormone-signaling",
"physiology"
],
"title": "MODEL2003060002 - Grigolon2018 - Responses to auxin signals Lab",
"models": [
{
"path": "models/core",
"alias": "signaling_sbml_grigolon2018_responses_to_auxin_signals_model2003060002_model"
},
{
"path": "models/visualisation",
"alias": "visualisation"
}
],
"wiring": [
{
"to": [
"visualisation.signaling_sbml_grigolon2018_responses_to_auxin_signals_model2003060002_model_state"
],
"from": "signaling_sbml_grigolon2018_responses_to_auxin_signals_model2003060002_model.state"
},
{
"to": [
"visualisation.signaling_sbml_grigolon2018_responses_to_auxin_signals_model2003060002_model_summary"
],
"from": "signaling_sbml_grigolon2018_responses_to_auxin_signals_model2003060002_model.summary"
},
{
"to": [
"visualisation.signaling_sbml_grigolon2018_responses_to_auxin_signals_model2003060002_model_species_labels"
],
"from": "signaling_sbml_grigolon2018_responses_to_auxin_signals_model2003060002_model.species_labels"
}
],
"package": "grigolon2018-responses-to-auxin-signals-model2003060002",
"runtime": {
"duration": 1,
"initial_inputs": {},
"communication_step": 0.1
},
"version": "1.0.0",
"description": "Clean Biosimulant lab for systems signaling model: Grigolon2018 - Responses to auxin signals. Values are native SBML quantities; equations, parameters, and initial values remain in the bundled source file.",
"schema_version": "2.0"
}Runtime
Duration1
Comms Step0.1
Runs
Total0
Completed0
Failed0
Metadata
Packagegrigolon2018-responses-to-auxin-signals-model2003060002
Created2026-05-16
Updated2026-06-13
signalingsystemssystems-biologysbmlfaithfulbiomodels_ebiplant-signalinghormone-signalingphysiologyvisualisationother