About lab
One published Lab
Build with this Lab. Run it anywhere.
Use the same immutable release locally or through managed cloud execution, with its exact version and provenance preserved.
Preparing exact examples…
Sen2013 - Phospholipid Synthesis in P.knowlesi The model describes the multiple phospholipid synthetic pathways in Plasmodium knowlesi. This model is described in the article: Kinetic modelling of pho.
Manifest
{
"io": {
"inputs": [
{
"name": "initial_ser_e",
"label": "Initial Ser E",
"maps_to": "systemsbiology_sbml_sen2013_phospholipid_synthesis_in_p_knowlesi_biomd0000000495_model.initial_ser_e",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `mw73259e20_240e_4f3a_b2e0_9ca248658898`."
},
{
"name": "initial_p_cho",
"label": "Initial P Cho",
"maps_to": "systemsbiology_sbml_sen2013_phospholipid_synthesis_in_p_knowlesi_biomd0000000495_model.initial_p_cho",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `mwcb834e43_dc57_45ae_9452_f4c10955caf1`."
},
{
"name": "initial_model_state_etn",
"label": "Initial Model State Etn",
"maps_to": "systemsbiology_sbml_sen2013_phospholipid_synthesis_in_p_knowlesi_biomd0000000495_model.initial_model_state_etn",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `mw8796c919_9251_4970_8f87_0bca9ecfeb5c`."
},
{
"name": "initial_cho_e",
"label": "Initial Cho E",
"maps_to": "systemsbiology_sbml_sen2013_phospholipid_synthesis_in_p_knowlesi_biomd0000000495_model.initial_cho_e",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `mw919f8a86_e702_4b24_9cd7_adad694fcf9b`."
},
{
"name": "initial_model_state_ser",
"label": "Initial Model State Ser",
"maps_to": "systemsbiology_sbml_sen2013_phospholipid_synthesis_in_p_knowlesi_biomd0000000495_model.initial_model_state_ser",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `mw15abaa48_d7d0_4845_ae04_c573d289d495`."
},
{
"name": "initial_model_state_ps",
"label": "Initial Model State Ps",
"maps_to": "systemsbiology_sbml_sen2013_phospholipid_synthesis_in_p_knowlesi_biomd0000000495_model.initial_model_state_ps",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `mwfcfaf604_14d4_47a6_b021_226d1fb5497c`."
}
],
"outputs": [
{
"name": "state",
"maps_to": "systemsbiology_sbml_sen2013_phospholipid_synthesis_in_p_knowlesi_biomd0000000495_model.state"
},
{
"name": "summary",
"maps_to": "systemsbiology_sbml_sen2013_phospholipid_synthesis_in_p_knowlesi_biomd0000000495_model.summary"
},
{
"name": "species_labels",
"maps_to": "systemsbiology_sbml_sen2013_phospholipid_synthesis_in_p_knowlesi_biomd0000000495_model.species_labels"
},
{
"name": "ser_e",
"maps_to": "systemsbiology_sbml_sen2013_phospholipid_synthesis_in_p_knowlesi_biomd0000000495_model.ser_e"
},
{
"name": "p_cho",
"maps_to": "systemsbiology_sbml_sen2013_phospholipid_synthesis_in_p_knowlesi_biomd0000000495_model.p_cho"
},
{
"name": "etn",
"maps_to": "systemsbiology_sbml_sen2013_phospholipid_synthesis_in_p_knowlesi_biomd0000000495_model.etn"
},
{
"name": "cho_e",
"maps_to": "systemsbiology_sbml_sen2013_phospholipid_synthesis_in_p_knowlesi_biomd0000000495_model.cho_e"
},
{
"name": "ser",
"maps_to": "systemsbiology_sbml_sen2013_phospholipid_synthesis_in_p_knowlesi_biomd0000000495_model.ser"
},
{
"name": "model_state_ps",
"maps_to": "systemsbiology_sbml_sen2013_phospholipid_synthesis_in_p_knowlesi_biomd0000000495_model.model_state_ps"
}
]
},
"tags": [
"systemsbiology",
"sbml",
"biomodels_ebi",
"faithful",
"curated"
],
"title": "Sen2013 Phospholipid Synthesis In P Knowlesi Lab",
"models": [
{
"path": "models/core",
"alias": "systemsbiology_sbml_sen2013_phospholipid_synthesis_in_p_knowlesi_biomd0000000495_model"
},
{
"path": "models/visualisation",
"alias": "visualisation"
}
],
"wiring": [
{
"to": [
"visualisation.systemsbiology_sbml_sen2013_phospholipid_synthesis_in_p_knowlesi_biomd0000000495_model_state"
],
"from": "systemsbiology_sbml_sen2013_phospholipid_synthesis_in_p_knowlesi_biomd0000000495_model.state"
},
{
"to": [
"visualisation.systemsbiology_sbml_sen2013_phospholipid_synthesis_in_p_knowlesi_biomd0000000495_model_summary"
],
"from": "systemsbiology_sbml_sen2013_phospholipid_synthesis_in_p_knowlesi_biomd0000000495_model.summary"
},
{
"to": [
"visualisation.systemsbiology_sbml_sen2013_phospholipid_synthesis_in_p_knowlesi_biomd0000000495_model_species_labels"
],
"from": "systemsbiology_sbml_sen2013_phospholipid_synthesis_in_p_knowlesi_biomd0000000495_model.species_labels"
}
],
"package": "sen2013-phospholipid-synthesis-in-p-knowlesi",
"runtime": {
"duration": 1,
"initial_inputs": {},
"communication_step": 0.1
},
"version": "1.0.0",
"description": "Sen2013 - Phospholipid Synthesis in P.knowlesi The model describes the multiple phospholipid synthetic pathways in Plasmodium knowlesi. This model is described in the article: Kinetic modelling of pho.",
"schema_version": "2.0"
}Runtime
Duration1
Comms Step0.1
Runs
Total0
Completed0
Failed0
Metadata
Packagesen2013-phospholipid-synthesis-in-p-knowlesi
Created2026-05-17
Updated2026-06-13
systemsbiologysbmlbiomodels_ebifaithfulcuratedvisualisationother