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Jason M. It can be used to explore systemsbiology graham2013 role of osteocytes in dynamics and compare simulation behavior across conditions.
Manifest
{
"io": {
"inputs": [
{
"name": "initial_osteocytes_s",
"label": "Initial Osteocytes S",
"maps_to": "systemsbiology_sbml_graham2013_role_of_osteocytes_in_targeted_bone_r_biomd0000000721_model.initial_osteocytes_s",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `Osteocytes__S`."
},
{
"name": "initial_bone_volume_z",
"label": "Initial Bone Volume Z",
"maps_to": "systemsbiology_sbml_graham2013_role_of_osteocytes_in_targeted_bone_r_biomd0000000721_model.initial_bone_volume_z",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `Bone_volume__z`."
},
{
"name": "initial_pre_osteoblasts_p",
"label": "Initial Pre Osteoblasts P",
"maps_to": "systemsbiology_sbml_graham2013_role_of_osteocytes_in_targeted_bone_r_biomd0000000721_model.initial_pre_osteoblasts_p",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `Pre_Osteoblasts__P`."
},
{
"name": "initial_osteoclasts_c",
"label": "Initial Osteoclasts C",
"maps_to": "systemsbiology_sbml_graham2013_role_of_osteocytes_in_targeted_bone_r_biomd0000000721_model.initial_osteoclasts_c",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `Osteoclasts__C`."
},
{
"name": "initial_osteoblasts_b",
"label": "Initial Osteoblasts B",
"maps_to": "systemsbiology_sbml_graham2013_role_of_osteocytes_in_targeted_bone_r_biomd0000000721_model.initial_osteoblasts_b",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `Osteoblasts__B`."
}
],
"outputs": [
{
"name": "state",
"maps_to": "systemsbiology_sbml_graham2013_role_of_osteocytes_in_targeted_bone_r_biomd0000000721_model.state"
},
{
"name": "summary",
"maps_to": "systemsbiology_sbml_graham2013_role_of_osteocytes_in_targeted_bone_r_biomd0000000721_model.summary"
},
{
"name": "species_labels",
"maps_to": "systemsbiology_sbml_graham2013_role_of_osteocytes_in_targeted_bone_r_biomd0000000721_model.species_labels"
},
{
"name": "osteocytes_s",
"maps_to": "systemsbiology_sbml_graham2013_role_of_osteocytes_in_targeted_bone_r_biomd0000000721_model.osteocytes_s"
},
{
"name": "bone_volume_z",
"maps_to": "systemsbiology_sbml_graham2013_role_of_osteocytes_in_targeted_bone_r_biomd0000000721_model.bone_volume_z"
},
{
"name": "pre_osteoblasts_p",
"maps_to": "systemsbiology_sbml_graham2013_role_of_osteocytes_in_targeted_bone_r_biomd0000000721_model.pre_osteoblasts_p"
},
{
"name": "osteoclasts_c",
"maps_to": "systemsbiology_sbml_graham2013_role_of_osteocytes_in_targeted_bone_r_biomd0000000721_model.osteoclasts_c"
},
{
"name": "osteoblasts_b",
"maps_to": "systemsbiology_sbml_graham2013_role_of_osteocytes_in_targeted_bone_r_biomd0000000721_model.osteoblasts_b"
}
]
},
"tags": [
"systemsbiology",
"sbml",
"biomodels_ebi",
"faithful",
"curated"
],
"title": "Graham2013 Role Of Osteocytes In Targeted Bone Remodeling Lab",
"models": [
{
"path": "models/core",
"alias": "systemsbiology_sbml_graham2013_role_of_osteocytes_in_targeted_bone_r_biomd0000000721_model"
},
{
"path": "models/visualisation",
"alias": "visualisation"
}
],
"wiring": [
{
"to": [
"visualisation.systemsbiology_sbml_graham2013_role_of_osteocytes_in_targeted_bone_r_biomd0000000721_model_state"
],
"from": "systemsbiology_sbml_graham2013_role_of_osteocytes_in_targeted_bone_r_biomd0000000721_model.state"
},
{
"to": [
"visualisation.systemsbiology_sbml_graham2013_role_of_osteocytes_in_targeted_bone_r_biomd0000000721_model_summary"
],
"from": "systemsbiology_sbml_graham2013_role_of_osteocytes_in_targeted_bone_r_biomd0000000721_model.summary"
},
{
"to": [
"visualisation.systemsbiology_sbml_graham2013_role_of_osteocytes_in_targeted_bone_r_biomd0000000721_model_species_labels"
],
"from": "systemsbiology_sbml_graham2013_role_of_osteocytes_in_targeted_bone_r_biomd0000000721_model.species_labels"
}
],
"package": "graham2013-role-of-osteocytes-in-targeted-bone-remodeling",
"runtime": {
"duration": 1,
"initial_inputs": {},
"communication_step": 0.1
},
"version": "1.0.0",
"description": "Jason M. It can be used to explore systemsbiology graham2013 role of osteocytes in dynamics and compare simulation behavior across conditions.",
"schema_version": "2.0"
}Runtime
Duration1
Comms Step0.1
Runs
Total0
Completed0
Failed0
Metadata
Packagegraham2013-role-of-osteocytes-in-targeted-bone-remodeling
Created2026-05-17
Updated2026-06-13
systemsbiologysbmlbiomodels_ebifaithfulcuratedvisualisationother