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This is an SBML version of the model described in: A kinetic model of dopamine- and calcium-dependent striatal synaptic plasticity. Nakano T, Doi T, Yoshimoto J, Doya K.
Manifest
{
"io": {
"inputs": [
{
"name": "initial_model_state_atp",
"label": "Initial Model State ATP",
"maps_to": "systemsbiology_sbml_nakano2010_synaptic_plasticity_model1101170000_model.initial_model_state_atp",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `ATP`."
},
{
"name": "initial_ac_gsa_atp",
"label": "Initial Ac Gsa ATP",
"maps_to": "systemsbiology_sbml_nakano2010_synaptic_plasticity_model1101170000_model.initial_ac_gsa_atp",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `AC_Gsa_ATP`."
},
{
"name": "initial_ac_gsa_ca_atp",
"label": "Initial Ac Gsa Ca ATP",
"maps_to": "systemsbiology_sbml_nakano2010_synaptic_plasticity_model1101170000_model.initial_ac_gsa_ca_atp",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `ACGsa_Ca_ATP`."
},
{
"name": "initial_cam_total",
"label": "Initial Cam Total",
"maps_to": "systemsbiology_sbml_nakano2010_synaptic_plasticity_model1101170000_model.initial_cam_total",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `Cam_total`."
},
{
"name": "initial_ca_m",
"label": "Initial Ca M",
"maps_to": "systemsbiology_sbml_nakano2010_synaptic_plasticity_model1101170000_model.initial_ca_m",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `CaM`."
},
{
"name": "initial_ca_mkii",
"label": "Initial Ca Mkii",
"maps_to": "systemsbiology_sbml_nakano2010_synaptic_plasticity_model1101170000_model.initial_ca_mkii",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `CaMKII`."
}
],
"outputs": [
{
"name": "state",
"maps_to": "systemsbiology_sbml_nakano2010_synaptic_plasticity_model1101170000_model.state"
},
{
"name": "summary",
"maps_to": "systemsbiology_sbml_nakano2010_synaptic_plasticity_model1101170000_model.summary"
},
{
"name": "species_labels",
"maps_to": "systemsbiology_sbml_nakano2010_synaptic_plasticity_model1101170000_model.species_labels"
},
{
"name": "atp",
"maps_to": "systemsbiology_sbml_nakano2010_synaptic_plasticity_model1101170000_model.atp"
},
{
"name": "ac_gsa_atp",
"maps_to": "systemsbiology_sbml_nakano2010_synaptic_plasticity_model1101170000_model.ac_gsa_atp"
},
{
"name": "ac_gsa_ca_atp",
"maps_to": "systemsbiology_sbml_nakano2010_synaptic_plasticity_model1101170000_model.ac_gsa_ca_atp"
},
{
"name": "cam_total",
"maps_to": "systemsbiology_sbml_nakano2010_synaptic_plasticity_model1101170000_model.cam_total"
},
{
"name": "ca_m",
"maps_to": "systemsbiology_sbml_nakano2010_synaptic_plasticity_model1101170000_model.ca_m"
},
{
"name": "ca_mkii",
"maps_to": "systemsbiology_sbml_nakano2010_synaptic_plasticity_model1101170000_model.ca_mkii"
}
]
},
"tags": [
"neuroscience",
"physiology",
"systemsbiology",
"sbml",
"biomodels_ebi",
"faithful",
"curated"
],
"title": "Nakano2010 Synaptic Plasticity Lab",
"models": [
{
"path": "models/core",
"alias": "systemsbiology_sbml_nakano2010_synaptic_plasticity_model1101170000_model"
},
{
"path": "models/visualisation",
"alias": "visualisation"
}
],
"wiring": [
{
"to": [
"visualisation.systemsbiology_sbml_nakano2010_synaptic_plasticity_model1101170000_model_state"
],
"from": "systemsbiology_sbml_nakano2010_synaptic_plasticity_model1101170000_model.state"
},
{
"to": [
"visualisation.systemsbiology_sbml_nakano2010_synaptic_plasticity_model1101170000_model_summary"
],
"from": "systemsbiology_sbml_nakano2010_synaptic_plasticity_model1101170000_model.summary"
},
{
"to": [
"visualisation.systemsbiology_sbml_nakano2010_synaptic_plasticity_model1101170000_model_species_labels"
],
"from": "systemsbiology_sbml_nakano2010_synaptic_plasticity_model1101170000_model.species_labels"
}
],
"package": "nakano2010-synaptic-plasticity",
"runtime": {
"duration": 1,
"initial_inputs": {},
"communication_step": 0.1
},
"version": "1.0.0",
"description": "This is an SBML version of the model described in: A kinetic model of dopamine- and calcium-dependent striatal synaptic plasticity. Nakano T, Doi T, Yoshimoto J, Doya K.",
"schema_version": "2.0"
}Runtime
Duration1
Comms Step0.1
Runs
Total0
Completed0
Failed0
Metadata
Packagenakano2010-synaptic-plasticity
Created2026-05-17
Updated2026-06-13
neurosciencephysiologysystemsbiologysbmlbiomodels_ebifaithfulcuratedvisualisationother