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Begitt2014 - STAT1 cooperative DNA binding - double GAS polymer model The importance of STAT1-cooperative DNA binding in type 1 and type 2 interferon signalling has been studies using experimental and. It can be used to explore immune response dynamics and compare pathway-level behavior across conditions.
Manifest
{
"io": {
"inputs": [
{
"name": "initial_unresolved_signaling_observable_1",
"label": "Initial Unresolved Signaling Observable 1",
"units": "native source value",
"default": 1.09648e-11,
"maps_to": "immunology_sbml_begitt2014_stat1_cooperative_dna_binding_double_biomd0000000501_model.initial_unresolved_signaling_observable_1",
"description": "Initial Unresolved Signaling Observable 1. Sets the initial value of bundled SBML species `S1`."
},
{
"name": "initial_unresolved_signaling_observable_2",
"label": "Initial Unresolved Signaling Observable 2",
"units": "native source value",
"default": 1e-10,
"maps_to": "immunology_sbml_begitt2014_stat1_cooperative_dna_binding_double_biomd0000000501_model.initial_unresolved_signaling_observable_2",
"description": "Initial Unresolved Signaling Observable 2. Sets the initial value of bundled SBML species `DNA0000`."
},
{
"name": "initial_unresolved_signaling_observable_3",
"label": "Initial Unresolved Signaling Observable 3",
"units": "native source value",
"default": 0,
"maps_to": "immunology_sbml_begitt2014_stat1_cooperative_dna_binding_double_biomd0000000501_model.initial_unresolved_signaling_observable_3",
"description": "Initial Unresolved Signaling Observable 3. Sets the initial value of bundled SBML species `DNA0001`."
},
{
"name": "initial_unresolved_signaling_observable_4",
"label": "Initial Unresolved Signaling Observable 4",
"units": "native source value",
"default": 0,
"maps_to": "immunology_sbml_begitt2014_stat1_cooperative_dna_binding_double_biomd0000000501_model.initial_unresolved_signaling_observable_4",
"description": "Initial Unresolved Signaling Observable 4. Sets the initial value of bundled SBML species `DNA0010`."
},
{
"name": "initial_unresolved_signaling_observable_5",
"label": "Initial Unresolved Signaling Observable 5",
"units": "native source value",
"default": 0,
"maps_to": "immunology_sbml_begitt2014_stat1_cooperative_dna_binding_double_biomd0000000501_model.initial_unresolved_signaling_observable_5",
"description": "Initial Unresolved Signaling Observable 5. Sets the initial value of bundled SBML species `DNA0100`."
}
],
"outputs": [
{
"name": "unresolved_signaling_observable_1",
"maps_to": "immunology_sbml_begitt2014_stat1_cooperative_dna_binding_double_biomd0000000501_model.unresolved_signaling_observable_1"
},
{
"name": "unresolved_signaling_observable_2",
"maps_to": "immunology_sbml_begitt2014_stat1_cooperative_dna_binding_double_biomd0000000501_model.unresolved_signaling_observable_2"
},
{
"name": "unresolved_signaling_observable_3",
"maps_to": "immunology_sbml_begitt2014_stat1_cooperative_dna_binding_double_biomd0000000501_model.unresolved_signaling_observable_3"
},
{
"name": "unresolved_signaling_observable_4",
"maps_to": "immunology_sbml_begitt2014_stat1_cooperative_dna_binding_double_biomd0000000501_model.unresolved_signaling_observable_4"
},
{
"name": "unresolved_signaling_observable_5",
"maps_to": "immunology_sbml_begitt2014_stat1_cooperative_dna_binding_double_biomd0000000501_model.unresolved_signaling_observable_5"
},
{
"name": "state",
"maps_to": "immunology_sbml_begitt2014_stat1_cooperative_dna_binding_double_biomd0000000501_model.state"
},
{
"name": "summary",
"maps_to": "immunology_sbml_begitt2014_stat1_cooperative_dna_binding_double_biomd0000000501_model.summary"
},
{
"name": "species_labels",
"maps_to": "immunology_sbml_begitt2014_stat1_cooperative_dna_binding_double_biomd0000000501_model.species_labels"
}
]
},
"title": "Begitt2014 - STAT1 cooperative DNA binding - double GAS polymer model Lab",
"models": [
{
"path": "models/core",
"alias": "immunology_sbml_begitt2014_stat1_cooperative_dna_binding_double_biomd0000000501_model"
},
{
"path": "models/visualisation",
"alias": "visualisation"
}
],
"wiring": [
{
"to": [
"visualisation.immunology_sbml_begitt2014_stat1_cooperative_dna_binding_double_biomd0000000501_model_state"
],
"from": "immunology_sbml_begitt2014_stat1_cooperative_dna_binding_double_biomd0000000501_model.state"
},
{
"to": [
"visualisation.immunology_sbml_begitt2014_stat1_cooperative_dna_binding_double_biomd0000000501_model_summary"
],
"from": "immunology_sbml_begitt2014_stat1_cooperative_dna_binding_double_biomd0000000501_model.summary"
},
{
"to": [
"visualisation.immunology_sbml_begitt2014_stat1_cooperative_dna_binding_double_biomd0000000501_model_species_labels"
],
"from": "immunology_sbml_begitt2014_stat1_cooperative_dna_binding_double_biomd0000000501_model.species_labels"
}
],
"package": "begitt2014-stat1-cooperative-dna-binding-double-gas-polymer",
"runtime": {
"duration": 10,
"initial_inputs": {},
"communication_step": 1
},
"version": "1.0.1",
"description": "Begitt2014 - STAT1 cooperative DNA binding - double GAS polymer model The importance of STAT1-cooperative DNA binding in type 1 and type 2 interferon signalling has been studies using experimental and. It can be used to explore immune response dynamics and compare pathway-level behavior across conditions.",
"schema_version": "2.0"
}Runtime
Duration10
Comms Step1
Runs
Total0
Completed0
Failed0
Metadata
Packagebegitt2014-stat1-cooperative-dna-binding-double-gas-polymer
Created2026-05-15
Updated2026-06-13
immunologysbmlbiomodels_ebifaithfulcuratedvisualisationother