About lab
One published Lab
Build with this Lab. Run it anywhere.
Use the same immutable release locally or through managed cloud execution, with its exact version and provenance preserved.
Preparing exact examples…
Source-faithful physiology lab for Friel, 1995. Public controls and outputs are mapped to real source symbols for calcium handling.
Manifest
{
"io": {
"inputs": [
{
"name": "initial_ca_s",
"label": "Initial Ca S",
"maps_to": "physiology_cellml_friel_1995_358_model.initial_ca_s",
"description": "Initial value for Ca S. Maps to source symbol `Ca_s`. Units: nanomolar. Naming evidence: source symbol, component, or units provide a direct public name.",
"accepted_units": [
"nanomolar"
]
},
{
"name": "initial_intracellular_calcium",
"label": "Initial Intracellular Calcium",
"maps_to": "physiology_cellml_friel_1995_358_model.initial_intracellular_calcium",
"description": "Initial value for Intracellular Calcium. Maps to source symbol `Ca_i`. Units: nanomolar. Naming evidence: source symbol, component, or units provide a direct public name.",
"accepted_units": [
"nanomolar"
]
}
],
"outputs": [
{
"name": "state",
"label": "Selected Source State",
"maps_to": "physiology_cellml_friel_1995_358_model.state"
},
{
"name": "summary",
"label": "Simulation Summary",
"maps_to": "physiology_cellml_friel_1995_358_model.summary"
},
{
"name": "trajectory",
"label": "Source Trajectory",
"maps_to": "physiology_cellml_friel_1995_358_model.trajectory"
},
{
"name": "variable_labels",
"label": "Observable Labels",
"maps_to": "physiology_cellml_friel_1995_358_model.variable_labels"
},
{
"name": "ca_s",
"label": "Ca S",
"maps_to": "physiology_cellml_friel_1995_358_model.ca_s",
"description": "Ca S. Maps to source symbol `Ca_s`. Units: nanomolar. Naming evidence: source symbol, component, or units provide a direct public name."
},
{
"name": "intracellular_calcium",
"label": "Intracellular Calcium",
"maps_to": "physiology_cellml_friel_1995_358_model.intracellular_calcium",
"description": "Intracellular Calcium. Maps to source symbol `Ca_i`. Units: nanomolar. Naming evidence: source symbol, component, or units provide a direct public name."
},
{
"name": "ca_i_ss",
"label": "Ca I Ss",
"maps_to": "physiology_cellml_friel_1995_358_model.ca_i_ss",
"description": "Ca I Ss. Maps to source symbol `Ca_i_ss`. Units: nanomolar. Naming evidence: source symbol, component, or units provide a direct public name."
},
{
"name": "ca_s_ss",
"label": "Ca S Ss",
"maps_to": "physiology_cellml_friel_1995_358_model.ca_s_ss",
"description": "Ca S Ss. Maps to source symbol `Ca_s_ss`. Units: nanomolar. Naming evidence: source symbol, component, or units provide a direct public name."
},
{
"name": "extracellular_calcium",
"label": "Extracellular Calcium",
"maps_to": "physiology_cellml_friel_1995_358_model.extracellular_calcium",
"description": "Extracellular Calcium. Maps to source symbol `Ca_o`. Units: nanomolar. Naming evidence: source symbol, component, or units provide a direct public name."
},
{
"name": "gamma",
"label": "Gamma",
"maps_to": "physiology_cellml_friel_1995_358_model.gamma",
"description": "Gamma. Maps to source symbol `gamma`. Units: dimensionless. Naming evidence: source symbol, component, or units provide a direct public name."
}
]
},
"title": "Friel1995 - Calcium Dynamics 358 Lab",
"models": [
{
"path": "models/core",
"alias": "physiology_cellml_friel_1995_358_model",
"parameters": {
"model_path": "data/friel_1995.cellml",
"integration_step": 0.01
}
},
{
"path": "models/visualisation",
"alias": "visualisation"
}
],
"wiring": [
{
"to": [
"visualisation.physiology_cellml_friel_1995_358_model_state"
],
"from": "physiology_cellml_friel_1995_358_model.state"
},
{
"to": [
"visualisation.physiology_cellml_friel_1995_358_model_summary"
],
"from": "physiology_cellml_friel_1995_358_model.summary"
},
{
"to": [
"visualisation.physiology_cellml_friel_1995_358_model_trajectory"
],
"from": "physiology_cellml_friel_1995_358_model.trajectory"
},
{
"to": [
"visualisation.physiology_cellml_friel_1995_358_model_variable_labels"
],
"from": "physiology_cellml_friel_1995_358_model.variable_labels"
}
],
"package": "friel1995-calcium-dynamics-358",
"runtime": {
"duration": 0.01,
"settle_steps": 1,
"initial_inputs": {},
"communication_step": 0.01
},
"version": "1.0.0",
"description": "Source-faithful physiology lab for Friel, 1995. Public controls and outputs are mapped to real source symbols for calcium handling.",
"schema_version": "2.0"
}Runtime
Duration0.01
Comms Step0.01
Settle Steps1
Runs
Total0
Completed0
Failed0
Metadata
Packagefriel1995-calcium-dynamics-358
Created2026-05-23
Updated2026-06-13
physiologycellmlphysiomefaithfulvisualisationother