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Single-model lab wrapper for Okuonghae2020 - SEAIR model of COVID-19 transmission in Lagos, Nigeria. This work examines the impact of various non-pharmaceutical control measures (government and personal) on the population dynamics of the novel coronavirus disease 2019 (COVID-19) in Lagos, Nigeria, us. It can be used to explore transmission dynamics and compare scenario outcomes across conditions.
Manifest
{
"io": {
"inputs": [
{
"name": "incubation_rate",
"label": "Incubation Rate",
"maps_to": "epidemiology_sbml_okuonghae2020_seair_model_of_covid_19_transmissi_biomd0000000991_model.incubation_rate"
}
],
"outputs": [
{
"name": "state",
"label": "Model state",
"maps_to": "epidemiology_sbml_okuonghae2020_seair_model_of_covid_19_transmissi_biomd0000000991_model.state"
},
{
"name": "summary",
"label": "Simulation summary",
"maps_to": "epidemiology_sbml_okuonghae2020_seair_model_of_covid_19_transmissi_biomd0000000991_model.summary"
},
{
"name": "species_labels",
"label": "Species labels",
"maps_to": "epidemiology_sbml_okuonghae2020_seair_model_of_covid_19_transmissi_biomd0000000991_model.species_labels"
},
{
"name": "asymptomatic",
"label": "Asymptomatic",
"maps_to": "epidemiology_sbml_okuonghae2020_seair_model_of_covid_19_transmissi_biomd0000000991_model.asymptomatic"
},
{
"name": "exposed",
"label": "Exposed",
"maps_to": "epidemiology_sbml_okuonghae2020_seair_model_of_covid_19_transmissi_biomd0000000991_model.exposed"
},
{
"name": "deceased",
"label": "Deceased",
"maps_to": "epidemiology_sbml_okuonghae2020_seair_model_of_covid_19_transmissi_biomd0000000991_model.deceased"
},
{
"name": "susceptible",
"label": "Susceptible",
"maps_to": "epidemiology_sbml_okuonghae2020_seair_model_of_covid_19_transmissi_biomd0000000991_model.susceptible"
},
{
"name": "recovered",
"label": "Recovered",
"maps_to": "epidemiology_sbml_okuonghae2020_seair_model_of_covid_19_transmissi_biomd0000000991_model.recovered"
},
{
"name": "symptomatic",
"label": "Symptomatic",
"maps_to": "epidemiology_sbml_okuonghae2020_seair_model_of_covid_19_transmissi_biomd0000000991_model.symptomatic"
},
{
"name": "detected",
"label": "Detected",
"maps_to": "epidemiology_sbml_okuonghae2020_seair_model_of_covid_19_transmissi_biomd0000000991_model.detected"
},
{
"name": "detected_cumulative",
"label": "Detected cumulative",
"maps_to": "epidemiology_sbml_okuonghae2020_seair_model_of_covid_19_transmissi_biomd0000000991_model.detected_cumulative"
}
]
},
"title": "Okuonghae2020 - SEAIR model of COVID-19 transmission in Lagos, Nigeria Lab",
"models": [
{
"path": "models/core",
"alias": "epidemiology_sbml_okuonghae2020_seair_model_of_covid_19_transmissi_biomd0000000991_model",
"parameters": {
"model_path": "data/BIOMD0000000991.xml",
"integration_step": 0.1
}
},
{
"path": "models/visualisation",
"alias": "visualisation"
}
],
"wiring": [
{
"to": [
"visualisation.epidemiology_sbml_okuonghae2020_seair_model_of_covid_19_transmissi_biomd0000000991_model_state"
],
"from": "epidemiology_sbml_okuonghae2020_seair_model_of_covid_19_transmissi_biomd0000000991_model.state"
},
{
"to": [
"visualisation.epidemiology_sbml_okuonghae2020_seair_model_of_covid_19_transmissi_biomd0000000991_model_summary"
],
"from": "epidemiology_sbml_okuonghae2020_seair_model_of_covid_19_transmissi_biomd0000000991_model.summary"
},
{
"to": [
"visualisation.epidemiology_sbml_okuonghae2020_seair_model_of_covid_19_transmissi_biomd0000000991_model_species_labels"
],
"from": "epidemiology_sbml_okuonghae2020_seair_model_of_covid_19_transmissi_biomd0000000991_model.species_labels"
}
],
"package": "okuonghae2020-covid-seair-lagos",
"runtime": {
"duration": 10,
"initial_inputs": {},
"communication_step": 0.1
},
"version": "1.0.0",
"description": "Single-model lab wrapper for Okuonghae2020 - SEAIR model of COVID-19 transmission in Lagos, Nigeria. This work examines the impact of various non-pharmaceutical control measures (government and personal) on the population dynamics of the novel coronavirus disease 2019 (COVID-19) in Lagos, Nigeria, us. It can be used to explore transmission dynamics and compare scenario outcomes across conditions.",
"schema_version": "2.0"
}Runtime
Duration10
Comms Step0.1
Runs
Total0
Completed0
Failed0
Metadata
Packageokuonghae2020-covid-seair-lagos
Created2026-05-15
Updated2026-06-13
biomodels_ebicuratedepidemiologyfaithfulsbmltelluriumvisualisationother