About lab
One published Lab
Build with this Lab. Run it anywhere.
Use the same immutable release locally or through managed cloud execution, with its exact version and provenance preserved.
Preparing exact examples…
This a model from the article: Oxidative ATP synthesis in skeletal muscle is controlled by substrate feedback. It can be used to explore systemsbiology wu2006 atpsynthesis skeletalmuscle model1006230034 dynamics and compare simulation behavior across conditions.
Manifest
{
"io": {
"inputs": [
{
"name": "initial_model_state_q_x",
"label": "Initial Model State Q X",
"maps_to": "systemsbiology_sbml_wu2006_atpsynthesis_skeletalmuscle_model1006230034_model.initial_model_state_q_x",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `Q_x`."
},
{
"name": "initial_pi_x",
"label": "Initial Pi X",
"maps_to": "systemsbiology_sbml_wu2006_atpsynthesis_skeletalmuscle_model1006230034_model.initial_pi_x",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `PI_x`."
},
{
"name": "initial_pi_i",
"label": "Initial Pi I",
"maps_to": "systemsbiology_sbml_wu2006_atpsynthesis_skeletalmuscle_model1006230034_model.initial_pi_i",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `PI_i`."
},
{
"name": "initial_pi_c",
"label": "Initial Pi C",
"maps_to": "systemsbiology_sbml_wu2006_atpsynthesis_skeletalmuscle_model1006230034_model.initial_pi_c",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `PI_c`."
},
{
"name": "initial_ph_x",
"label": "Initial Ph X",
"maps_to": "systemsbiology_sbml_wu2006_atpsynthesis_skeletalmuscle_model1006230034_model.initial_ph_x",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `pH_x`."
},
{
"name": "initial_p_cr_c",
"label": "Initial P Cr C",
"maps_to": "systemsbiology_sbml_wu2006_atpsynthesis_skeletalmuscle_model1006230034_model.initial_p_cr_c",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `PCr_c`."
}
],
"outputs": [
{
"name": "state",
"maps_to": "systemsbiology_sbml_wu2006_atpsynthesis_skeletalmuscle_model1006230034_model.state"
},
{
"name": "summary",
"maps_to": "systemsbiology_sbml_wu2006_atpsynthesis_skeletalmuscle_model1006230034_model.summary"
},
{
"name": "species_labels",
"maps_to": "systemsbiology_sbml_wu2006_atpsynthesis_skeletalmuscle_model1006230034_model.species_labels"
},
{
"name": "q_x",
"maps_to": "systemsbiology_sbml_wu2006_atpsynthesis_skeletalmuscle_model1006230034_model.q_x"
},
{
"name": "pi_x",
"maps_to": "systemsbiology_sbml_wu2006_atpsynthesis_skeletalmuscle_model1006230034_model.pi_x"
},
{
"name": "pi_i",
"maps_to": "systemsbiology_sbml_wu2006_atpsynthesis_skeletalmuscle_model1006230034_model.pi_i"
},
{
"name": "pi_c",
"maps_to": "systemsbiology_sbml_wu2006_atpsynthesis_skeletalmuscle_model1006230034_model.pi_c"
},
{
"name": "ph_x",
"maps_to": "systemsbiology_sbml_wu2006_atpsynthesis_skeletalmuscle_model1006230034_model.ph_x"
},
{
"name": "p_cr_c",
"maps_to": "systemsbiology_sbml_wu2006_atpsynthesis_skeletalmuscle_model1006230034_model.p_cr_c"
}
]
},
"tags": [
"metabolism",
"physiology",
"systemsbiology",
"sbml",
"biomodels_ebi",
"faithful",
"curated"
],
"title": "Wu2006 Atpsynthesis Skeletalmuscle Lab",
"models": [
{
"path": "models/core",
"alias": "systemsbiology_sbml_wu2006_atpsynthesis_skeletalmuscle_model1006230034_model"
},
{
"path": "models/visualisation",
"alias": "visualisation"
}
],
"wiring": [
{
"to": [
"visualisation.systemsbiology_sbml_wu2006_atpsynthesis_skeletalmuscle_model1006230034_model_state"
],
"from": "systemsbiology_sbml_wu2006_atpsynthesis_skeletalmuscle_model1006230034_model.state"
},
{
"to": [
"visualisation.systemsbiology_sbml_wu2006_atpsynthesis_skeletalmuscle_model1006230034_model_summary"
],
"from": "systemsbiology_sbml_wu2006_atpsynthesis_skeletalmuscle_model1006230034_model.summary"
},
{
"to": [
"visualisation.systemsbiology_sbml_wu2006_atpsynthesis_skeletalmuscle_model1006230034_model_species_labels"
],
"from": "systemsbiology_sbml_wu2006_atpsynthesis_skeletalmuscle_model1006230034_model.species_labels"
}
],
"package": "wu2006-atpsynthesis-skeletalmuscle",
"runtime": {
"duration": 1,
"initial_inputs": {},
"communication_step": 0.1
},
"version": "1.0.0",
"description": "This a model from the article: Oxidative ATP synthesis in skeletal muscle is controlled by substrate feedback. It can be used to explore systemsbiology wu2006 atpsynthesis skeletalmuscle model1006230034 dynamics and compare simulation behavior across conditions.",
"schema_version": "2.0"
}Runtime
Duration1
Comms Step0.1
Runs
Total0
Completed0
Failed0
Metadata
Packagewu2006-atpsynthesis-skeletalmuscle
Created2026-05-17
Updated2026-06-13
metabolismphysiologysystemsbiologysbmlbiomodels_ebifaithfulcuratedvisualisationother