Rutkis2013 - Entner-Doudoroff pathway in Z.mobilis (cell-free) Lab

{
  "io": {
    "inputs": [
      {
        "name": "initial_source_defined_co2_state",
        "label": "Initial source-defined CO2 state",
        "maps_to": "signaling_sbml_rutkis2013_entner_doudoroff_pathway_in_z_mobilis_model1409050001_model.initial_source_defined_co2_state",
        "description": "Initial level of source-defined CO2 state. Maps to SBML symbol `CO2`; exposed as a traceable initial-condition perturbation."
      }
    ],
    "outputs": [
      {
        "name": "glucex",
        "label": "Glucex",
        "maps_to": "signaling_sbml_rutkis2013_entner_doudoroff_pathway_in_z_mobilis_model1409050001_model.glucex",
        "description": "Glucex. Maps to SBML symbol `GLCo` and is emitted in native SBML units."
      },
      {
        "name": "ethanolex",
        "label": "Ethanolex",
        "maps_to": "signaling_sbml_rutkis2013_entner_doudoroff_pathway_in_z_mobilis_model1409050001_model.ethanolex",
        "description": "Ethanolex. Maps to SBML symbol `species_1` and is emitted in native SBML units."
      },
      {
        "name": "gluccy",
        "label": "Gluccy",
        "maps_to": "signaling_sbml_rutkis2013_entner_doudoroff_pathway_in_z_mobilis_model1409050001_model.gluccy",
        "description": "Gluccy. Maps to SBML symbol `GLCi` and is emitted in native SBML units."
      },
      {
        "name": "state",
        "label": "Observable state",
        "maps_to": "signaling_sbml_rutkis2013_entner_doudoroff_pathway_in_z_mobilis_model1409050001_model.state"
      },
      {
        "name": "summary",
        "label": "Simulation summary",
        "maps_to": "signaling_sbml_rutkis2013_entner_doudoroff_pathway_in_z_mobilis_model1409050001_model.summary"
      },
      {
        "name": "species_labels",
        "label": "Observable labels",
        "maps_to": "signaling_sbml_rutkis2013_entner_doudoroff_pathway_in_z_mobilis_model1409050001_model.species_labels"
      }
    ]
  },
  "tags": [
    "signaling",
    "systems",
    "systems-biology",
    "sbml",
    "faithful",
    "biomodels_ebi",
    "cellular-signaling"
  ],
  "title": "Rutkis2013 - Entner-Doudoroff pathway in Z.mobilis (cell-free) Lab",
  "models": [
    {
      "path": "models/core",
      "alias": "signaling_sbml_rutkis2013_entner_doudoroff_pathway_in_z_mobilis_model1409050001_model"
    },
    {
      "path": "models/visualisation",
      "alias": "visualisation"
    }
  ],
  "wiring": [
    {
      "to": [
        "visualisation.signaling_sbml_rutkis2013_entner_doudoroff_pathway_in_z_mobilis_model1409050001_model_state"
      ],
      "from": "signaling_sbml_rutkis2013_entner_doudoroff_pathway_in_z_mobilis_model1409050001_model.state"
    },
    {
      "to": [
        "visualisation.signaling_sbml_rutkis2013_entner_doudoroff_pathway_in_z_mobilis_model1409050001_model_summary"
      ],
      "from": "signaling_sbml_rutkis2013_entner_doudoroff_pathway_in_z_mobilis_model1409050001_model.summary"
    },
    {
      "to": [
        "visualisation.signaling_sbml_rutkis2013_entner_doudoroff_pathway_in_z_mobilis_model1409050001_model_species_labels"
      ],
      "from": "signaling_sbml_rutkis2013_entner_doudoroff_pathway_in_z_mobilis_model1409050001_model.species_labels"
    }
  ],
  "package": "rutkis2013-entner-doudoroff-pathway-in-z-mobilis-model1409050001",
  "runtime": {
    "duration": 1,
    "initial_inputs": {},
    "communication_step": 0.1
  },
  "version": "1.0.0",
  "description": "Clean Biosimulant lab for systems signaling model: Rutkis2013 - Entner-Doudoroff pathway in Z.mobilis (cell-free). Values are native SBML quantities; equations, parameters, and initial values remain in the bundled source file.",
  "schema_version": "2.0"
}