About lab
One published Lab
Build with this Lab. Run it anywhere.
Use the same immutable release locally or through managed cloud execution, with its exact version and provenance preserved.
Preparing exact examples…
This model originates from BioModels Database: A Database of Annotated Published Models (http://www.ebi.ac.uk/biomodels/). It is copyright (c) 2005-2011 The BioModels.net Team.
Manifest
{
"io": {
"inputs": [
{
"name": "initial_target_genes_br_ex_il_1_il_8_il_6_tnf_alpha_ifn_gamma_gm_csf_m_csf_br_i_nos_cox2_mhc_class_i_ii_e_selectin_beta_defensin2",
"label": "Initial Target Genes Br Ex Il 1 Il 8 Il 6 TNF Alpha Ifn Gamma Gm Csf M Csf Br I Nos Cox2 Mhc Class I Ii E Selectin Beta Defensin2",
"maps_to": "systemsbiology_sbml_oda2006_tollliker_model2463683119_model.initial_target_genes_br_ex_il_1_il_8_il_6_tnf_alpha_ifn_gamma_gm_csf_m_csf_br_i_nos_cox2_mhc_class_i_ii_e_selectin_beta_defensin2",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `s1290`."
},
{
"name": "initial_target_genes_br_ex_cyclin_d1",
"label": "Initial Target Genes Br Ex Cyclin D1",
"maps_to": "systemsbiology_sbml_oda2006_tollliker_model2463683119_model.initial_target_genes_br_ex_cyclin_d1",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `s1304`."
},
{
"name": "initial_cell_cycle",
"label": "Initial Cell Cycle",
"maps_to": "systemsbiology_sbml_oda2006_tollliker_model2463683119_model.initial_cell_cycle",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `s1138`."
},
{
"name": "initial_rna_br_metabolism",
"label": "Initial RNA Br Metabolism",
"maps_to": "systemsbiology_sbml_oda2006_tollliker_model2463683119_model.initial_rna_br_metabolism",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `s805`."
},
{
"name": "initial_complex_rip1_traf6_ticam1",
"label": "Initial Complex Rip1 Traf6 Ticam1",
"maps_to": "systemsbiology_sbml_oda2006_tollliker_model2463683119_model.initial_complex_rip1_traf6_ticam1",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `s288`."
},
{
"name": "initial_transcription",
"label": "Initial Transcription",
"maps_to": "systemsbiology_sbml_oda2006_tollliker_model2463683119_model.initial_transcription",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `s1184`."
}
],
"outputs": [
{
"name": "state",
"maps_to": "systemsbiology_sbml_oda2006_tollliker_model2463683119_model.state"
},
{
"name": "summary",
"maps_to": "systemsbiology_sbml_oda2006_tollliker_model2463683119_model.summary"
},
{
"name": "species_labels",
"maps_to": "systemsbiology_sbml_oda2006_tollliker_model2463683119_model.species_labels"
},
{
"name": "target_genes_br_ex_il_1_il_8_il_6_tnf_alpha_ifn_gamma_gm_csf_m_csf_br_i_nos_cox2_mhc_class_i_ii_e_selectin_beta_defensin2",
"maps_to": "systemsbiology_sbml_oda2006_tollliker_model2463683119_model.target_genes_br_ex_il_1_il_8_il_6_tnf_alpha_ifn_gamma_gm_csf_m_csf_br_i_nos_cox2_mhc_class_i_ii_e_selectin_beta_defensin2"
},
{
"name": "target_genes_br_ex_cyclin_d1",
"maps_to": "systemsbiology_sbml_oda2006_tollliker_model2463683119_model.target_genes_br_ex_cyclin_d1"
},
{
"name": "cell_cycle",
"maps_to": "systemsbiology_sbml_oda2006_tollliker_model2463683119_model.cell_cycle"
},
{
"name": "rna_br_metabolism",
"maps_to": "systemsbiology_sbml_oda2006_tollliker_model2463683119_model.rna_br_metabolism"
},
{
"name": "complex_rip1_traf6_ticam1",
"maps_to": "systemsbiology_sbml_oda2006_tollliker_model2463683119_model.complex_rip1_traf6_ticam1"
},
{
"name": "transcription",
"maps_to": "systemsbiology_sbml_oda2006_tollliker_model2463683119_model.transcription"
}
]
},
"tags": [
"systemsbiology",
"sbml",
"biomodels_ebi",
"faithful",
"curated"
],
"title": "Oda2006 Tollliker Lab",
"models": [
{
"path": "models/core",
"alias": "systemsbiology_sbml_oda2006_tollliker_model2463683119_model"
},
{
"path": "models/visualisation",
"alias": "visualisation"
}
],
"wiring": [
{
"to": [
"visualisation.systemsbiology_sbml_oda2006_tollliker_model2463683119_model_state"
],
"from": "systemsbiology_sbml_oda2006_tollliker_model2463683119_model.state"
},
{
"to": [
"visualisation.systemsbiology_sbml_oda2006_tollliker_model2463683119_model_summary"
],
"from": "systemsbiology_sbml_oda2006_tollliker_model2463683119_model.summary"
},
{
"to": [
"visualisation.systemsbiology_sbml_oda2006_tollliker_model2463683119_model_species_labels"
],
"from": "systemsbiology_sbml_oda2006_tollliker_model2463683119_model.species_labels"
}
],
"package": "oda2006-tollliker",
"runtime": {
"duration": 1,
"initial_inputs": {},
"communication_step": 0.1
},
"version": "1.0.0",
"description": "This model originates from BioModels Database: A Database of Annotated Published Models (http://www.ebi.ac.uk/biomodels/). It is copyright (c) 2005-2011 The BioModels.net Team.",
"schema_version": "2.0"
}Runtime
Duration1
Comms Step0.1
Runs
Total0
Completed0
Failed0
Metadata
Packageoda2006-tollliker
Created2026-05-17
Updated2026-06-13
systemsbiologysbmlbiomodels_ebifaithfulcuratedvisualisationother