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Single-model lab wrapper for Smith&Moore2004 - The SIR model for the spread of HongKong Flu. This is the SIR model for disease spread of the Hong Kong flu in New York City in the late 1960's. It can be used to explore transmission dynamics and compare scenario outcomes across conditions.
Manifest
{
"io": {
"inputs": [
{
"name": "transmission_rate",
"label": "Transmission Rate",
"maps_to": "epidemiology_sbml_smithandmoore2004_the_sir_model_for_the_spread_o_biomd0000001045_model.transmission_rate"
}
],
"outputs": [
{
"name": "state",
"label": "Model state",
"maps_to": "epidemiology_sbml_smithandmoore2004_the_sir_model_for_the_spread_o_biomd0000001045_model.state"
},
{
"name": "summary",
"label": "Simulation summary",
"maps_to": "epidemiology_sbml_smithandmoore2004_the_sir_model_for_the_spread_o_biomd0000001045_model.summary"
},
{
"name": "species_labels",
"label": "Species labels",
"maps_to": "epidemiology_sbml_smithandmoore2004_the_sir_model_for_the_spread_o_biomd0000001045_model.species_labels"
},
{
"name": "infected",
"label": "Infected",
"maps_to": "epidemiology_sbml_smithandmoore2004_the_sir_model_for_the_spread_o_biomd0000001045_model.infected"
},
{
"name": "susceptible",
"label": "Susceptible",
"maps_to": "epidemiology_sbml_smithandmoore2004_the_sir_model_for_the_spread_o_biomd0000001045_model.susceptible"
},
{
"name": "recovered",
"label": "Recovered",
"maps_to": "epidemiology_sbml_smithandmoore2004_the_sir_model_for_the_spread_o_biomd0000001045_model.recovered"
}
]
},
"title": "Smith&Moore2004 - The SIR model for the spread of HongKong Flu Lab",
"models": [
{
"path": "models/core",
"alias": "epidemiology_sbml_smithandmoore2004_the_sir_model_for_the_spread_o_biomd0000001045_model",
"parameters": {
"model_path": "data/BIOMD0000001045.xml",
"integration_step": 0.1
}
},
{
"path": "models/visualisation",
"alias": "visualisation"
}
],
"wiring": [
{
"to": [
"visualisation.epidemiology_sbml_smithandmoore2004_the_sir_model_for_the_spread_o_biomd0000001045_model_state"
],
"from": "epidemiology_sbml_smithandmoore2004_the_sir_model_for_the_spread_o_biomd0000001045_model.state"
},
{
"to": [
"visualisation.epidemiology_sbml_smithandmoore2004_the_sir_model_for_the_spread_o_biomd0000001045_model_summary"
],
"from": "epidemiology_sbml_smithandmoore2004_the_sir_model_for_the_spread_o_biomd0000001045_model.summary"
},
{
"to": [
"visualisation.epidemiology_sbml_smithandmoore2004_the_sir_model_for_the_spread_o_biomd0000001045_model_species_labels"
],
"from": "epidemiology_sbml_smithandmoore2004_the_sir_model_for_the_spread_o_biomd0000001045_model.species_labels"
}
],
"package": "smithmoore2004-hong-kong-flu-sir",
"runtime": {
"duration": 10,
"initial_inputs": {},
"communication_step": 0.1
},
"version": "1.0.0",
"description": "Single-model lab wrapper for Smith&Moore2004 - The SIR model for the spread of HongKong Flu. This is the SIR model for disease spread of the Hong Kong flu in New York City in the late 1960's. It can be used to explore transmission dynamics and compare scenario outcomes across conditions.",
"schema_version": "2.0"
}Runtime
Duration10
Comms Step0.1
Runs
Total0
Completed0
Failed0
Metadata
Packagesmithmoore2004-hong-kong-flu-sir
Created2026-05-15
Updated2026-06-13
biomodels_ebicuratedepidemiologyfaithfulsbmltelluriumvisualisationother