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This a model from the article: A kinetic study of a ternary cycle between adenine nucleotides. Valero E, Varón R, García-Carmona F FEBS J.
Manifest
{
"io": {
"inputs": [
{
"name": "initial_nadh",
"label": "Initial Nadh",
"maps_to": "systemsbiology_sbml_valero2006_adenine_ternarycycle_biomd0000000231_model.initial_nadh",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `NADH`."
},
{
"name": "initial_model_state_atp",
"label": "Initial Model State ATP",
"maps_to": "systemsbiology_sbml_valero2006_adenine_ternarycycle_biomd0000000231_model.initial_model_state_atp",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `ATP`."
},
{
"name": "initial_model_state_adp",
"label": "Initial Model State ADP",
"maps_to": "systemsbiology_sbml_valero2006_adenine_ternarycycle_biomd0000000231_model.initial_model_state_adp",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `ADP`."
},
{
"name": "initial_model_state_pyr",
"label": "Initial Model State Pyr",
"maps_to": "systemsbiology_sbml_valero2006_adenine_ternarycycle_biomd0000000231_model.initial_model_state_pyr",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `Pyr`."
},
{
"name": "initial_model_state_lac",
"label": "Initial Model State Lac",
"maps_to": "systemsbiology_sbml_valero2006_adenine_ternarycycle_biomd0000000231_model.initial_model_state_lac",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `Lac`."
},
{
"name": "initial_model_state_amp",
"label": "Initial Model State AMP",
"maps_to": "systemsbiology_sbml_valero2006_adenine_ternarycycle_biomd0000000231_model.initial_model_state_amp",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `AMP`."
}
],
"outputs": [
{
"name": "state",
"maps_to": "systemsbiology_sbml_valero2006_adenine_ternarycycle_biomd0000000231_model.state"
},
{
"name": "summary",
"maps_to": "systemsbiology_sbml_valero2006_adenine_ternarycycle_biomd0000000231_model.summary"
},
{
"name": "species_labels",
"maps_to": "systemsbiology_sbml_valero2006_adenine_ternarycycle_biomd0000000231_model.species_labels"
},
{
"name": "nadh",
"maps_to": "systemsbiology_sbml_valero2006_adenine_ternarycycle_biomd0000000231_model.nadh"
},
{
"name": "atp",
"maps_to": "systemsbiology_sbml_valero2006_adenine_ternarycycle_biomd0000000231_model.atp"
},
{
"name": "adp",
"maps_to": "systemsbiology_sbml_valero2006_adenine_ternarycycle_biomd0000000231_model.adp"
},
{
"name": "pyr",
"maps_to": "systemsbiology_sbml_valero2006_adenine_ternarycycle_biomd0000000231_model.pyr"
},
{
"name": "lac",
"maps_to": "systemsbiology_sbml_valero2006_adenine_ternarycycle_biomd0000000231_model.lac"
},
{
"name": "amp",
"maps_to": "systemsbiology_sbml_valero2006_adenine_ternarycycle_biomd0000000231_model.amp"
}
]
},
"tags": [
"generegulation",
"systemsbiology",
"sbml",
"biomodels_ebi",
"faithful",
"curated"
],
"title": "Valero2006 Adenine Ternarycycle Lab",
"models": [
{
"path": "models/core",
"alias": "systemsbiology_sbml_valero2006_adenine_ternarycycle_biomd0000000231_model"
},
{
"path": "models/visualisation",
"alias": "visualisation"
}
],
"wiring": [
{
"to": [
"visualisation.systemsbiology_sbml_valero2006_adenine_ternarycycle_biomd0000000231_model_state"
],
"from": "systemsbiology_sbml_valero2006_adenine_ternarycycle_biomd0000000231_model.state"
},
{
"to": [
"visualisation.systemsbiology_sbml_valero2006_adenine_ternarycycle_biomd0000000231_model_summary"
],
"from": "systemsbiology_sbml_valero2006_adenine_ternarycycle_biomd0000000231_model.summary"
},
{
"to": [
"visualisation.systemsbiology_sbml_valero2006_adenine_ternarycycle_biomd0000000231_model_species_labels"
],
"from": "systemsbiology_sbml_valero2006_adenine_ternarycycle_biomd0000000231_model.species_labels"
}
],
"package": "valero2006-adenine-ternarycycle",
"runtime": {
"duration": 1,
"initial_inputs": {},
"communication_step": 0.1
},
"version": "1.0.0",
"description": "This a model from the article: A kinetic study of a ternary cycle between adenine nucleotides. Valero E, Varón R, García-Carmona F FEBS J.",
"schema_version": "2.0"
}Runtime
Duration1
Comms Step0.1
Runs
Total0
Completed0
Failed0
Metadata
Packagevalero2006-adenine-ternarycycle
Created2026-05-17
Updated2026-06-13
generegulationsystemsbiologysbmlbiomodels_ebifaithfulcuratedvisualisationother