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Xenopus histone expression kinetics. This model is described in the article: Kinetics of histone gene expression during early development of Xenopus laevis. It can be used to explore generegulation koster1988 histone expression model5954483266 dynamics and compare simulation behavior across conditions.
Manifest
{
"io": {
"inputs": [],
"outputs": [
{
"name": "histone_rna",
"maps_to": "koster1988_histone_expression.histone_rna"
},
{
"name": "histone_protein",
"maps_to": "koster1988_histone_expression.histone_protein"
},
{
"name": "state",
"maps_to": "koster1988_histone_expression.state"
},
{
"name": "summary",
"maps_to": "koster1988_histone_expression.summary"
},
{
"name": "species_labels",
"maps_to": "koster1988_histone_expression.species_labels"
}
]
},
"title": "Koster1988 Histone Expression Lab",
"models": [
{
"path": "models/core",
"alias": "koster1988_histone_expression",
"parameters": {
"model_path": "data/MODEL5954483266.xml",
"integration_step": 0.1
}
},
{
"path": "models/visualisation",
"alias": "visualisation"
}
],
"wiring": [
{
"to": [
"visualisation.koster1988_histone_expression_histone_rna"
],
"from": "koster1988_histone_expression.histone_rna"
},
{
"to": [
"visualisation.koster1988_histone_expression_histone_protein"
],
"from": "koster1988_histone_expression.histone_protein"
},
{
"to": [
"visualisation.koster1988_histone_expression_state"
],
"from": "koster1988_histone_expression.state"
},
{
"to": [
"visualisation.koster1988_histone_expression_summary"
],
"from": "koster1988_histone_expression.summary"
},
{
"to": [
"visualisation.koster1988_histone_expression_species_labels"
],
"from": "koster1988_histone_expression.species_labels"
}
],
"package": "koster1988-histone-expression",
"runtime": {
"duration": 10,
"initial_inputs": {},
"communication_step": 1
},
"version": "1.0.1",
"description": "Xenopus histone expression kinetics. This model is described in the article: Kinetics of histone gene expression during early development of Xenopus laevis. It can be used to explore generegulation koster1988 histone expression model5954483266 dynamics and compare simulation behavior across conditions.",
"schema_version": "2.0"
}Runtime
Duration10
Comms Step1
Runs
Total0
Completed0
Failed0
Metadata
Packagekoster1988-histone-expression
Created2026-05-15
Updated2026-06-13
generegulationsbmlbiomodels_ebifaithfulvisualisationother