Verma2016 - HIV and HPV co-infection, T-cell response Lab

{
  "io": {
    "inputs": [
      {
        "name": "initial_unresolved_infection_observable_1",
        "label": "Initial Unresolved Infection Observable 1",
        "units": "native source value",
        "default": 48000,
        "maps_to": "immunology_sbml_verma2016_hiv_and_hpv_co_infection_t_cell_respon_biomd0000000872_model.initial_unresolved_infection_observable_1",
        "description": "Initial Unresolved Infection Observable 1. Sets the initial value of bundled SBML species `s2`."
      },
      {
        "name": "initial_unresolved_infection_observable_2",
        "label": "Initial Unresolved Infection Observable 2",
        "units": "native source value",
        "default": 2364.02569593148,
        "maps_to": "immunology_sbml_verma2016_hiv_and_hpv_co_infection_t_cell_respon_biomd0000000872_model.initial_unresolved_infection_observable_2",
        "description": "Initial Unresolved Infection Observable 2. Sets the initial value of bundled SBML species `s3`."
      },
      {
        "name": "initial_unresolved_infection_observable_3",
        "label": "Initial Unresolved Infection Observable 3",
        "units": "native source value",
        "default": 250000,
        "maps_to": "immunology_sbml_verma2016_hiv_and_hpv_co_infection_t_cell_respon_biomd0000000872_model.initial_unresolved_infection_observable_3",
        "description": "Initial Unresolved Infection Observable 3. Sets the initial value of bundled SBML species `s4`."
      },
      {
        "name": "initial_unresolved_infection_observable_4",
        "label": "Initial Unresolved Infection Observable 4",
        "units": "native source value",
        "default": 0,
        "maps_to": "immunology_sbml_verma2016_hiv_and_hpv_co_infection_t_cell_respon_biomd0000000872_model.initial_unresolved_infection_observable_4",
        "description": "Initial Unresolved Infection Observable 4. Sets the initial value of bundled SBML species `s14`."
      },
      {
        "name": "initial_unresolved_infection_observable_5",
        "label": "Initial Unresolved Infection Observable 5",
        "units": "native source value",
        "default": 0.01,
        "maps_to": "immunology_sbml_verma2016_hiv_and_hpv_co_infection_t_cell_respon_biomd0000000872_model.initial_unresolved_infection_observable_5",
        "description": "Initial Unresolved Infection Observable 5. Sets the initial value of bundled SBML species `s16`."
      },
      {
        "name": "decay_of_t_cells_rate",
        "label": "Decay Of T Cells Rate",
        "units": "native source value",
        "default": 0.01,
        "maps_to": "immunology_sbml_verma2016_hiv_and_hpv_co_infection_t_cell_respon_biomd0000000872_model.decay_of_t_cells_rate",
        "description": "Decay Of T Cells Rate. Sets bundled SBML parameter `d`."
      }
    ],
    "outputs": [
      {
        "name": "unresolved_infection_observable_1",
        "maps_to": "immunology_sbml_verma2016_hiv_and_hpv_co_infection_t_cell_respon_biomd0000000872_model.unresolved_infection_observable_1"
      },
      {
        "name": "unresolved_infection_observable_2",
        "maps_to": "immunology_sbml_verma2016_hiv_and_hpv_co_infection_t_cell_respon_biomd0000000872_model.unresolved_infection_observable_2"
      },
      {
        "name": "unresolved_infection_observable_3",
        "maps_to": "immunology_sbml_verma2016_hiv_and_hpv_co_infection_t_cell_respon_biomd0000000872_model.unresolved_infection_observable_3"
      },
      {
        "name": "unresolved_infection_observable_4",
        "maps_to": "immunology_sbml_verma2016_hiv_and_hpv_co_infection_t_cell_respon_biomd0000000872_model.unresolved_infection_observable_4"
      },
      {
        "name": "unresolved_infection_observable_5",
        "maps_to": "immunology_sbml_verma2016_hiv_and_hpv_co_infection_t_cell_respon_biomd0000000872_model.unresolved_infection_observable_5"
      },
      {
        "name": "state",
        "maps_to": "immunology_sbml_verma2016_hiv_and_hpv_co_infection_t_cell_respon_biomd0000000872_model.state"
      },
      {
        "name": "summary",
        "maps_to": "immunology_sbml_verma2016_hiv_and_hpv_co_infection_t_cell_respon_biomd0000000872_model.summary"
      },
      {
        "name": "species_labels",
        "maps_to": "immunology_sbml_verma2016_hiv_and_hpv_co_infection_t_cell_respon_biomd0000000872_model.species_labels"
      }
    ]
  },
  "title": "Verma2016 - HIV and HPV co-infection, T-cell response Lab",
  "models": [
    {
      "path": "models/core",
      "alias": "immunology_sbml_verma2016_hiv_and_hpv_co_infection_t_cell_respon_biomd0000000872_model"
    },
    {
      "path": "models/visualisation",
      "alias": "visualisation"
    }
  ],
  "wiring": [
    {
      "to": [
        "visualisation.immunology_sbml_verma2016_hiv_and_hpv_co_infection_t_cell_respon_biomd0000000872_model_state"
      ],
      "from": "immunology_sbml_verma2016_hiv_and_hpv_co_infection_t_cell_respon_biomd0000000872_model.state"
    },
    {
      "to": [
        "visualisation.immunology_sbml_verma2016_hiv_and_hpv_co_infection_t_cell_respon_biomd0000000872_model_summary"
      ],
      "from": "immunology_sbml_verma2016_hiv_and_hpv_co_infection_t_cell_respon_biomd0000000872_model.summary"
    },
    {
      "to": [
        "visualisation.immunology_sbml_verma2016_hiv_and_hpv_co_infection_t_cell_respon_biomd0000000872_model_species_labels"
      ],
      "from": "immunology_sbml_verma2016_hiv_and_hpv_co_infection_t_cell_respon_biomd0000000872_model.species_labels"
    }
  ],
  "package": "verma2016-hiv-and-hpv-co-infection-t-cell",
  "runtime": {
    "duration": 10,
    "initial_inputs": {},
    "communication_step": 1
  },
  "version": "1.0.0",
  "description": "This is a COPASI version of the HIV/HPV coinfection model submitted to PLoS One.Title: Modeling the mechanisms by which HIV-associated immunosuppression influences HPV persistence at the oral mucosaAu. It can be used to explore immune response dynamics and compare pathway-level behavior across conditions.",
  "schema_version": "2.0"
}