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Proctor2017 - Identifying microRNA for muscle regeneration during ageing (Mir1_in_muscle) This model is described in the article: Using computer simulation models to investigate the most promising mic. It can be used to explore systemsbiology proctor2017 identifying microrna for muscle dynamics and compare simulation behavior across conditions.
Manifest
{
"io": {
"inputs": [
{
"name": "initial_myo_d",
"label": "Initial Myo D",
"maps_to": "systemsbiology_sbml_proctor2017_identifying_microrna_for_muscle_rege_model1704110000_model.initial_myo_d",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `MyoD`."
},
{
"name": "initial_mi_r1",
"label": "Initial Mi R1",
"maps_to": "systemsbiology_sbml_proctor2017_identifying_microrna_for_muscle_rege_model1704110000_model.initial_mi_r1",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `miR1`."
},
{
"name": "initial_pax3_mrna",
"label": "Initial Pax3 MRNA",
"maps_to": "systemsbiology_sbml_proctor2017_identifying_microrna_for_muscle_rege_model1704110000_model.initial_pax3_mrna",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `Pax3_mRNA`."
},
{
"name": "initial_pax3",
"label": "Initial Pax3",
"maps_to": "systemsbiology_sbml_proctor2017_identifying_microrna_for_muscle_rege_model1704110000_model.initial_pax3",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `Pax3`."
},
{
"name": "initial_myo_d_gene",
"label": "Initial Myo D Gene",
"maps_to": "systemsbiology_sbml_proctor2017_identifying_microrna_for_muscle_rege_model1704110000_model.initial_myo_d_gene",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `MyoD_gene`."
},
{
"name": "initial_mi_r1_gene",
"label": "Initial Mi R1 Gene",
"maps_to": "systemsbiology_sbml_proctor2017_identifying_microrna_for_muscle_rege_model1704110000_model.initial_mi_r1_gene",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `miR1_gene`."
}
],
"outputs": [
{
"name": "state",
"maps_to": "systemsbiology_sbml_proctor2017_identifying_microrna_for_muscle_rege_model1704110000_model.state"
},
{
"name": "summary",
"maps_to": "systemsbiology_sbml_proctor2017_identifying_microrna_for_muscle_rege_model1704110000_model.summary"
},
{
"name": "species_labels",
"maps_to": "systemsbiology_sbml_proctor2017_identifying_microrna_for_muscle_rege_model1704110000_model.species_labels"
},
{
"name": "myo_d",
"maps_to": "systemsbiology_sbml_proctor2017_identifying_microrna_for_muscle_rege_model1704110000_model.myo_d"
},
{
"name": "mi_r1",
"maps_to": "systemsbiology_sbml_proctor2017_identifying_microrna_for_muscle_rege_model1704110000_model.mi_r1"
},
{
"name": "pax3_mrna",
"maps_to": "systemsbiology_sbml_proctor2017_identifying_microrna_for_muscle_rege_model1704110000_model.pax3_mrna"
},
{
"name": "pax3",
"maps_to": "systemsbiology_sbml_proctor2017_identifying_microrna_for_muscle_rege_model1704110000_model.pax3"
},
{
"name": "myo_d_gene",
"maps_to": "systemsbiology_sbml_proctor2017_identifying_microrna_for_muscle_rege_model1704110000_model.myo_d_gene"
},
{
"name": "mi_r1_gene",
"maps_to": "systemsbiology_sbml_proctor2017_identifying_microrna_for_muscle_rege_model1704110000_model.mi_r1_gene"
}
]
},
"tags": [
"generegulation",
"physiology",
"systemsbiology",
"sbml",
"biomodels_ebi",
"faithful",
"curated"
],
"title": "MODEL1704110000 Variant Proctor2017 Identifying Microrna For Muscle Regeneration During Ageing Lab",
"models": [
{
"path": "models/core",
"alias": "systemsbiology_sbml_proctor2017_identifying_microrna_for_muscle_rege_model1704110000_model"
},
{
"path": "models/visualisation",
"alias": "visualisation"
}
],
"wiring": [
{
"to": [
"visualisation.systemsbiology_sbml_proctor2017_identifying_microrna_for_muscle_rege_model1704110000_model_state"
],
"from": "systemsbiology_sbml_proctor2017_identifying_microrna_for_muscle_rege_model1704110000_model.state"
},
{
"to": [
"visualisation.systemsbiology_sbml_proctor2017_identifying_microrna_for_muscle_rege_model1704110000_model_summary"
],
"from": "systemsbiology_sbml_proctor2017_identifying_microrna_for_muscle_rege_model1704110000_model.summary"
},
{
"to": [
"visualisation.systemsbiology_sbml_proctor2017_identifying_microrna_for_muscle_rege_model1704110000_model_species_labels"
],
"from": "systemsbiology_sbml_proctor2017_identifying_microrna_for_muscle_rege_model1704110000_model.species_labels"
}
],
"package": "proctor2017-identifying-microrna-for-muscle-regeneratio-3315db19",
"runtime": {
"duration": 1,
"initial_inputs": {},
"communication_step": 0.1
},
"version": "1.0.0",
"description": "Proctor2017 - Identifying microRNA for muscle regeneration during ageing (Mir1_in_muscle) This model is described in the article: Using computer simulation models to investigate the most promising mic. It can be used to explore systemsbiology proctor2017 identifying microrna for muscle dynamics and compare simulation behavior across conditions.",
"schema_version": "2.0"
}Runtime
Duration1
Comms Step0.1
Runs
Total0
Completed0
Failed0
Metadata
Packageproctor2017-identifying-microrna-for-muscle-regeneratio-3315db19
Created2026-05-17
Updated2026-06-13
generegulationphysiologysystemsbiologysbmlbiomodels_ebifaithfulcuratedvisualisationother