Smith2004 - Development Active Ion Transport Whole Cell Modelling Lab

{
  "io": {
    "inputs": [
      {
        "name": "initial_c_mg_adp_concentration",
        "label": "Initial C Mg ADP Concentration",
        "maps_to": "physiology_cellml_smith_crampin_2004_smithcrampin2004_model.initial_c_mg_adp_concentration",
        "description": "Initial value for C Mg ADP Concentration. Maps to source symbol `cMgADP`. Units: concentration. Naming evidence: source symbol, component, or units provide a direct public name.",
        "accepted_units": [
          "concentration"
        ]
      },
      {
        "name": "initial_c_na_i_concentration",
        "label": "Initial C Na I Concentration",
        "maps_to": "physiology_cellml_smith_crampin_2004_smithcrampin2004_model.initial_c_na_i_concentration",
        "description": "Initial value for C Na I Concentration. Maps to source symbol `cNa_i`. Units: concentration. Naming evidence: source symbol, component, or units provide a direct public name.",
        "accepted_units": [
          "concentration"
        ]
      }
    ],
    "outputs": [
      {
        "name": "state",
        "label": "Selected Source State",
        "maps_to": "physiology_cellml_smith_crampin_2004_smithcrampin2004_model.state"
      },
      {
        "name": "summary",
        "label": "Simulation Summary",
        "maps_to": "physiology_cellml_smith_crampin_2004_smithcrampin2004_model.summary"
      },
      {
        "name": "trajectory",
        "label": "Source Trajectory",
        "maps_to": "physiology_cellml_smith_crampin_2004_smithcrampin2004_model.trajectory"
      },
      {
        "name": "variable_labels",
        "label": "Observable Labels",
        "maps_to": "physiology_cellml_smith_crampin_2004_smithcrampin2004_model.variable_labels"
      },
      {
        "name": "c_mg_adp_concentration",
        "label": "C Mg ADP Concentration",
        "maps_to": "physiology_cellml_smith_crampin_2004_smithcrampin2004_model.c_mg_adp_concentration",
        "description": "C Mg ADP Concentration. Maps to source symbol `cMgADP`. Units: concentration. Naming evidence: source symbol, component, or units provide a direct public name."
      },
      {
        "name": "c_mg_atp_concentration",
        "label": "C Mg ATP Concentration",
        "maps_to": "physiology_cellml_smith_crampin_2004_smithcrampin2004_model.c_mg_atp_concentration",
        "description": "C Mg ATP Concentration. Maps to source symbol `cMgATP`. Units: concentration. Naming evidence: source symbol, component, or units provide a direct public name."
      },
      {
        "name": "d_g_atp",
        "label": "D G ATP",
        "maps_to": "physiology_cellml_smith_crampin_2004_smithcrampin2004_model.d_g_atp",
        "description": "D G ATP. Maps to source symbol `dG_ATP`. Units: energy. Naming evidence: source symbol, component, or units provide a direct public name."
      },
      {
        "name": "dimless_mg_atp",
        "label": "Dimless Mg ATP",
        "maps_to": "physiology_cellml_smith_crampin_2004_smithcrampin2004_model.dimless_mg_atp",
        "description": "Dimless Mg ATP. Maps to source symbol `dimless_MgATP`. Units: dimensionless. Naming evidence: source symbol, component, or units provide a direct public name."
      },
      {
        "name": "eq_mg_atp",
        "label": "Eq Mg ATP",
        "maps_to": "physiology_cellml_smith_crampin_2004_smithcrampin2004_model.eq_mg_atp",
        "description": "Eq Mg ATP. Maps to source symbol `eq_MgATP`. Units: concentration. Naming evidence: source symbol, component, or units provide a direct public name."
      },
      {
        "name": "c_na_i_concentration",
        "label": "C Na I Concentration",
        "maps_to": "physiology_cellml_smith_crampin_2004_smithcrampin2004_model.c_na_i_concentration",
        "description": "C Na I Concentration. Maps to source symbol `cNa_i`. Units: concentration. Naming evidence: source symbol, component, or units provide a direct public name."
      }
    ]
  },
  "title": "Smith2004 - Development Active Ion Transport Whole Cell Modelling Lab",
  "models": [
    {
      "path": "models/core",
      "alias": "physiology_cellml_smith_crampin_2004_smithcrampin2004_model",
      "parameters": {
        "model_path": "data/smith_crampin_2004.cellml",
        "integration_step": 0.01
      }
    },
    {
      "path": "models/visualisation",
      "alias": "visualisation"
    }
  ],
  "wiring": [
    {
      "to": [
        "visualisation.physiology_cellml_smith_crampin_2004_smithcrampin2004_model_state"
      ],
      "from": "physiology_cellml_smith_crampin_2004_smithcrampin2004_model.state"
    },
    {
      "to": [
        "visualisation.physiology_cellml_smith_crampin_2004_smithcrampin2004_model_summary"
      ],
      "from": "physiology_cellml_smith_crampin_2004_smithcrampin2004_model.summary"
    },
    {
      "to": [
        "visualisation.physiology_cellml_smith_crampin_2004_smithcrampin2004_model_trajectory"
      ],
      "from": "physiology_cellml_smith_crampin_2004_smithcrampin2004_model.trajectory"
    },
    {
      "to": [
        "visualisation.physiology_cellml_smith_crampin_2004_smithcrampin2004_model_variable_labels"
      ],
      "from": "physiology_cellml_smith_crampin_2004_smithcrampin2004_model.variable_labels"
    }
  ],
  "package": "smith2004-development-active-ion-transport-whole-cell-modelling",
  "runtime": {
    "duration": 0.01,
    "settle_steps": 1,
    "initial_inputs": {},
    "communication_step": 0.01
  },
  "version": "1.0.1",
  "description": "Source-faithful physiology lab for Smith, Crampin, 2004. Public controls and outputs are mapped to real source symbols for transport physiology.",
  "schema_version": "2.0"
}