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This model is from the article: Time Scale Simulation of Vmax of Urea Cycle Enzymes. Pradip Bhattacharya, Alok Srivastava, Sarbashish Das, Samiyadeep Nandi, Ganeshan Tamil, Ashutosh Viswabandhu, Heman.
Manifest
{
"io": {
"inputs": [
{
"name": "initial_node9",
"label": "Initial Node9",
"maps_to": "systemsbiology_sbml_bhattacharya2011_ureacycle_model0318212660_model.initial_node9",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `Node9`."
},
{
"name": "initial_node8",
"label": "Initial Node8",
"maps_to": "systemsbiology_sbml_bhattacharya2011_ureacycle_model0318212660_model.initial_node8",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `Node8`."
},
{
"name": "initial_node7",
"label": "Initial Node7",
"maps_to": "systemsbiology_sbml_bhattacharya2011_ureacycle_model0318212660_model.initial_node7",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `Node7`."
},
{
"name": "initial_node6",
"label": "Initial Node6",
"maps_to": "systemsbiology_sbml_bhattacharya2011_ureacycle_model0318212660_model.initial_node6",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `Node6`."
},
{
"name": "initial_node4",
"label": "Initial Node4",
"maps_to": "systemsbiology_sbml_bhattacharya2011_ureacycle_model0318212660_model.initial_node4",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `Node4`."
},
{
"name": "initial_node3",
"label": "Initial Node3",
"maps_to": "systemsbiology_sbml_bhattacharya2011_ureacycle_model0318212660_model.initial_node3",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `Node3`."
}
],
"outputs": [
{
"name": "state",
"maps_to": "systemsbiology_sbml_bhattacharya2011_ureacycle_model0318212660_model.state"
},
{
"name": "summary",
"maps_to": "systemsbiology_sbml_bhattacharya2011_ureacycle_model0318212660_model.summary"
},
{
"name": "species_labels",
"maps_to": "systemsbiology_sbml_bhattacharya2011_ureacycle_model0318212660_model.species_labels"
},
{
"name": "node9",
"maps_to": "systemsbiology_sbml_bhattacharya2011_ureacycle_model0318212660_model.node9"
},
{
"name": "node8",
"maps_to": "systemsbiology_sbml_bhattacharya2011_ureacycle_model0318212660_model.node8"
},
{
"name": "node7",
"maps_to": "systemsbiology_sbml_bhattacharya2011_ureacycle_model0318212660_model.node7"
},
{
"name": "node6",
"maps_to": "systemsbiology_sbml_bhattacharya2011_ureacycle_model0318212660_model.node6"
},
{
"name": "node4",
"maps_to": "systemsbiology_sbml_bhattacharya2011_ureacycle_model0318212660_model.node4"
},
{
"name": "node3",
"maps_to": "systemsbiology_sbml_bhattacharya2011_ureacycle_model0318212660_model.node3"
}
]
},
"tags": [
"metabolism",
"systemsbiology",
"sbml",
"biomodels_ebi",
"faithful",
"curated"
],
"title": "Bhattacharya2011 Ureacycle Lab",
"models": [
{
"path": "models/core",
"alias": "systemsbiology_sbml_bhattacharya2011_ureacycle_model0318212660_model"
},
{
"path": "models/visualisation",
"alias": "visualisation"
}
],
"wiring": [
{
"to": [
"visualisation.systemsbiology_sbml_bhattacharya2011_ureacycle_model0318212660_model_state"
],
"from": "systemsbiology_sbml_bhattacharya2011_ureacycle_model0318212660_model.state"
},
{
"to": [
"visualisation.systemsbiology_sbml_bhattacharya2011_ureacycle_model0318212660_model_summary"
],
"from": "systemsbiology_sbml_bhattacharya2011_ureacycle_model0318212660_model.summary"
},
{
"to": [
"visualisation.systemsbiology_sbml_bhattacharya2011_ureacycle_model0318212660_model_species_labels"
],
"from": "systemsbiology_sbml_bhattacharya2011_ureacycle_model0318212660_model.species_labels"
}
],
"package": "bhattacharya2011-ureacycle",
"runtime": {
"duration": 1,
"initial_inputs": {},
"communication_step": 0.1
},
"version": "1.0.0",
"description": "This model is from the article: Time Scale Simulation of Vmax of Urea Cycle Enzymes. Pradip Bhattacharya, Alok Srivastava, Sarbashish Das, Samiyadeep Nandi, Ganeshan Tamil, Ashutosh Viswabandhu, Heman.",
"schema_version": "2.0"
}Runtime
Duration1
Comms Step0.1
Runs
Total0
Completed0
Failed0
Metadata
Packagebhattacharya2011-ureacycle
Created2026-05-17
Updated2026-06-13
metabolismsystemsbiologysbmlbiomodels_ebifaithfulcuratedvisualisationother