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Source-faithful physiology lab for Potter, Zager, Barton, 2006. Public controls and outputs are mapped to real source symbols for source-model physiology.
Manifest
{
"io": {
"inputs": [
{
"name": "initial_albumin_testosterone_complex_in_the_prostate",
"label": "Initial Albumin Testosterone Complex In The Prostate",
"maps_to": "physiology_cellml_potter_zager_barton_2006_potterzagerbarton2006_model.initial_albumin_testosterone_complex_in_the_prostate",
"description": "Initial value for Albumin Testosterone Complex In The Prostate. Maps to source symbol `ATp`. Units: nanomole. Naming evidence: source metadata names `ATp` as `albumin-testosterone complex in the prostate`.",
"accepted_units": [
"nanomole"
]
},
{
"name": "initial_albumin_5alpha_dihydrotestosterone_complex_in_the_prostate",
"label": "Initial Albumin 5alpha Dihydrotestosterone Complex In The Prostate",
"maps_to": "physiology_cellml_potter_zager_barton_2006_potterzagerbarton2006_model.initial_albumin_5alpha_dihydrotestosterone_complex_in_the_prostate",
"description": "Initial value for Albumin 5alpha Dihydrotestosterone Complex In The Prostate. Maps to source symbol `ADp`. Units: nanomole. Naming evidence: source metadata names `ADp` as `albumin-5alpha-dihydrotestosterone complex in the prostate`.",
"accepted_units": [
"nanomole"
]
}
],
"outputs": [
{
"name": "state",
"label": "Selected Source State",
"maps_to": "physiology_cellml_potter_zager_barton_2006_potterzagerbarton2006_model.state"
},
{
"name": "summary",
"label": "Simulation Summary",
"maps_to": "physiology_cellml_potter_zager_barton_2006_potterzagerbarton2006_model.summary"
},
{
"name": "trajectory",
"label": "Source Trajectory",
"maps_to": "physiology_cellml_potter_zager_barton_2006_potterzagerbarton2006_model.trajectory"
},
{
"name": "variable_labels",
"label": "Observable Labels",
"maps_to": "physiology_cellml_potter_zager_barton_2006_potterzagerbarton2006_model.variable_labels"
},
{
"name": "albumin_testosterone_complex_in_the_prostate",
"label": "Albumin Testosterone Complex In The Prostate",
"maps_to": "physiology_cellml_potter_zager_barton_2006_potterzagerbarton2006_model.albumin_testosterone_complex_in_the_prostate",
"description": "Albumin Testosterone Complex In The Prostate. Maps to source symbol `ATp`. Units: nanomole. Naming evidence: source metadata names `ATp` as `albumin-testosterone complex in the prostate`."
},
{
"name": "albumin_5alpha_dihydrotestosterone_complex_in_the_prostate",
"label": "Albumin 5alpha Dihydrotestosterone Complex In The Prostate",
"maps_to": "physiology_cellml_potter_zager_barton_2006_potterzagerbarton2006_model.albumin_5alpha_dihydrotestosterone_complex_in_the_prostate",
"description": "Albumin 5alpha Dihydrotestosterone Complex In The Prostate. Maps to source symbol `ADp`. Units: nanomole. Naming evidence: source metadata names `ADp` as `albumin-5alpha-dihydrotestosterone complex in the prostate`."
},
{
"name": "calcium",
"label": "Calcium",
"maps_to": "physiology_cellml_potter_zager_barton_2006_potterzagerbarton2006_model.calcium",
"description": "Calcium. Maps to source symbol `CA`. Units: nM. Naming evidence: source symbol, component, or units provide a direct public name."
},
{
"name": "adb",
"label": "Adb",
"maps_to": "physiology_cellml_potter_zager_barton_2006_potterzagerbarton2006_model.adb",
"description": "Adb. Maps to source symbol `ADb`. Units: nanomole. Naming evidence: source symbol, component, or units provide a direct public name."
},
{
"name": "albumin_5alpha_dihydrotestosterone_complex_in_the_blood",
"label": "Albumin 5alpha Dihydrotestosterone Complex In The Blood",
"maps_to": "physiology_cellml_potter_zager_barton_2006_potterzagerbarton2006_model.albumin_5alpha_dihydrotestosterone_complex_in_the_blood",
"description": "Albumin 5alpha Dihydrotestosterone Complex In The Blood. Maps to source symbol `ADbl`. Units: nanomole. Naming evidence: source metadata names `ADbl` as `albumin-5alpha-dihydrotestosterone complex in the blood`."
},
{
"name": "albumin_5alpha_dihydrotestosterone_complex_in_the_liver",
"label": "Albumin 5alpha Dihydrotestosterone Complex In The Liver",
"maps_to": "physiology_cellml_potter_zager_barton_2006_potterzagerbarton2006_model.albumin_5alpha_dihydrotestosterone_complex_in_the_liver",
"description": "Albumin 5alpha Dihydrotestosterone Complex In The Liver. Maps to source symbol `ADl`. Units: nanomole. Naming evidence: source metadata names `ADl` as `albumin-5alpha-dihydrotestosterone complex in the liver`."
}
]
},
"title": "Potter2006 - Mathematical Androgenic Regulation Prostate Intact Lab",
"models": [
{
"path": "models/core",
"alias": "physiology_cellml_potter_zager_barton_2006_potterzagerbarton2006_model",
"parameters": {
"model_path": "data/potter_zager_barton_2006.cellml",
"integration_step": 0.01
}
},
{
"path": "models/visualisation",
"alias": "visualisation"
}
],
"wiring": [
{
"to": [
"visualisation.physiology_cellml_potter_zager_barton_2006_potterzagerbarton2006_model_state"
],
"from": "physiology_cellml_potter_zager_barton_2006_potterzagerbarton2006_model.state"
},
{
"to": [
"visualisation.physiology_cellml_potter_zager_barton_2006_potterzagerbarton2006_model_summary"
],
"from": "physiology_cellml_potter_zager_barton_2006_potterzagerbarton2006_model.summary"
},
{
"to": [
"visualisation.physiology_cellml_potter_zager_barton_2006_potterzagerbarton2006_model_trajectory"
],
"from": "physiology_cellml_potter_zager_barton_2006_potterzagerbarton2006_model.trajectory"
},
{
"to": [
"visualisation.physiology_cellml_potter_zager_barton_2006_potterzagerbarton2006_model_variable_labels"
],
"from": "physiology_cellml_potter_zager_barton_2006_potterzagerbarton2006_model.variable_labels"
}
],
"package": "potter2006-mathematical-androgenic-regulation-prostate-intact",
"runtime": {
"duration": 0.01,
"settle_steps": 1,
"initial_inputs": {},
"communication_step": 0.01
},
"version": "1.0.0",
"description": "Source-faithful physiology lab for Potter, Zager, Barton, 2006. Public controls and outputs are mapped to real source symbols for source-model physiology.",
"schema_version": "2.0"
}Runtime
Duration0.01
Comms Step0.01
Settle Steps1
Runs
Total0
Completed0
Failed0
Metadata
Packagepotter2006-mathematical-androgenic-regulation-prostate-intact
Created2026-05-23
Updated2026-06-13
physiologycellmlphysiomefaithfulvisualisationother