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Clean Biosimulant lab for cell-cycle regulatory signaling. Values are native SBML quantities; equations, parameters, and initial values remain in the bundled source file.
Manifest
{
"io": {
"inputs": [
{
"name": "initial_cdk2p21",
"label": "Initial CDK2P21",
"maps_to": "signaling_sbml_mueller2015_hepatocyte_proliferation_t160_phosph_biomd0000000568_model.initial_cdk2p21",
"description": "Initial level of CDK2P21. Maps to SBML symbol `ObsCDK2P21_obs`; exposed as a traceable initial-condition perturbation."
},
{
"name": "initial_dnacontent",
"label": "Initial Dnacontent",
"maps_to": "signaling_sbml_mueller2015_hepatocyte_proliferation_t160_phosph_biomd0000000568_model.initial_dnacontent",
"description": "Initial level of Dnacontent. Maps to SBML symbol `ObsDNAContent_obs`; exposed as a traceable initial-condition perturbation."
},
{
"name": "initial_source_defined_hgf_state",
"label": "Initial source-defined HGF state",
"maps_to": "signaling_sbml_mueller2015_hepatocyte_proliferation_t160_phosph_biomd0000000568_model.initial_source_defined_hgf_state",
"description": "Initial level of source-defined HGF state. Maps to SBML symbol `hgf`; exposed as a traceable initial-condition perturbation."
}
],
"outputs": [
{
"name": "inh_erk",
"label": "Inh ERK",
"maps_to": "signaling_sbml_mueller2015_hepatocyte_proliferation_t160_phosph_biomd0000000568_model.inh_erk",
"description": "Inh ERK. Maps to SBML symbol `inherk` and is emitted in native SBML units."
},
{
"name": "inh_akt",
"label": "Inh AKT",
"maps_to": "signaling_sbml_mueller2015_hepatocyte_proliferation_t160_phosph_biomd0000000568_model.inh_akt",
"description": "Inh AKT. Maps to SBML symbol `inhakt` and is emitted in native SBML units."
},
{
"name": "cyto_c2e_t160_u_b",
"label": "Cyto C2E T160 U B",
"maps_to": "signaling_sbml_mueller2015_hepatocyte_proliferation_t160_phosph_biomd0000000568_model.cyto_c2e_t160_u_b",
"description": "Cyto C2E T160 U B. Maps to SBML symbol `S4` and is emitted in native SBML units."
},
{
"name": "state",
"label": "Observable state",
"maps_to": "signaling_sbml_mueller2015_hepatocyte_proliferation_t160_phosph_biomd0000000568_model.state"
},
{
"name": "summary",
"label": "Simulation summary",
"maps_to": "signaling_sbml_mueller2015_hepatocyte_proliferation_t160_phosph_biomd0000000568_model.summary"
},
{
"name": "species_labels",
"label": "Observable labels",
"maps_to": "signaling_sbml_mueller2015_hepatocyte_proliferation_t160_phosph_biomd0000000568_model.species_labels"
}
]
},
"tags": [
"signaling",
"systems",
"systems-biology",
"sbml",
"faithful",
"biomodels_ebi",
"cell-cycle-signaling"
],
"title": "Mueller2015 - Hepatocyte proliferation, T160 phosphorylation of CDK2 Lab",
"models": [
{
"path": "models/core",
"alias": "signaling_sbml_mueller2015_hepatocyte_proliferation_t160_phosph_biomd0000000568_model"
},
{
"path": "models/visualisation",
"alias": "visualisation"
}
],
"wiring": [
{
"to": [
"visualisation.signaling_sbml_mueller2015_hepatocyte_proliferation_t160_phosph_biomd0000000568_model_state"
],
"from": "signaling_sbml_mueller2015_hepatocyte_proliferation_t160_phosph_biomd0000000568_model.state"
},
{
"to": [
"visualisation.signaling_sbml_mueller2015_hepatocyte_proliferation_t160_phosph_biomd0000000568_model_summary"
],
"from": "signaling_sbml_mueller2015_hepatocyte_proliferation_t160_phosph_biomd0000000568_model.summary"
},
{
"to": [
"visualisation.signaling_sbml_mueller2015_hepatocyte_proliferation_t160_phosph_biomd0000000568_model_species_labels"
],
"from": "signaling_sbml_mueller2015_hepatocyte_proliferation_t160_phosph_biomd0000000568_model.species_labels"
}
],
"package": "mueller2015-hepatocyte-proliferation-t160-phosph",
"runtime": {
"duration": 1,
"initial_inputs": {},
"communication_step": 0.1
},
"version": "1.0.0",
"description": "Clean Biosimulant lab for cell-cycle regulatory signaling. Values are native SBML quantities; equations, parameters, and initial values remain in the bundled source file.",
"schema_version": "2.0"
}Runtime
Duration1
Comms Step0.1
Runs
Total0
Completed0
Failed0
Metadata
Packagemueller2015-hepatocyte-proliferation-t160-phosph
Created2026-05-16
Updated2026-06-13
signalingsystemssystems-biologysbmlfaithfulbiomodels_ebicell-cycle-signalingvisualisationother