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Source-faithful physiology lab for Matsuoka, Sarai, Kuratomi, Ono, Noma, 2003. Public controls and outputs are mapped to real source symbols for electrophysiology.
Manifest
{
"io": {
"inputs": [
{
"name": "initial_p_ai_na",
"label": "Initial P Ai Na",
"maps_to": "physiology_cellml_matsuoka_sarai_kuratomi_ono_noma_2003_matsuokasaraikuratomiononoma2003_model.initial_p_ai_na",
"description": "Initial value for P Ai Na. Maps to source symbol `p_AI_Na`. Units: dimensionless. Naming evidence: source symbol, component, or units provide a direct public name.",
"accepted_units": [
"dimensionless"
]
},
{
"name": "initial_p_ap_na",
"label": "Initial P Ap Na",
"maps_to": "physiology_cellml_matsuoka_sarai_kuratomi_ono_noma_2003_matsuokasaraikuratomiononoma2003_model.initial_p_ap_na",
"description": "Initial value for P Ap Na. Maps to source symbol `p_AP_Na`. Units: dimensionless. Naming evidence: source symbol, component, or units provide a direct public name.",
"accepted_units": [
"dimensionless"
]
}
],
"outputs": [
{
"name": "state",
"label": "Selected Source State",
"maps_to": "physiology_cellml_matsuoka_sarai_kuratomi_ono_noma_2003_matsuokasaraikuratomiononoma2003_model.state"
},
{
"name": "summary",
"label": "Simulation Summary",
"maps_to": "physiology_cellml_matsuoka_sarai_kuratomi_ono_noma_2003_matsuokasaraikuratomiononoma2003_model.summary"
},
{
"name": "trajectory",
"label": "Source Trajectory",
"maps_to": "physiology_cellml_matsuoka_sarai_kuratomi_ono_noma_2003_matsuokasaraikuratomiononoma2003_model.trajectory"
},
{
"name": "variable_labels",
"label": "Observable Labels",
"maps_to": "physiology_cellml_matsuoka_sarai_kuratomi_ono_noma_2003_matsuokasaraikuratomiononoma2003_model.variable_labels"
},
{
"name": "p_ai_na",
"label": "P Ai Na",
"maps_to": "physiology_cellml_matsuoka_sarai_kuratomi_ono_noma_2003_matsuokasaraikuratomiononoma2003_model.p_ai_na",
"description": "P Ai Na. Maps to source symbol `p_AI_Na`. Units: dimensionless. Naming evidence: source symbol, component, or units provide a direct public name."
},
{
"name": "p_ap_na",
"label": "P Ap Na",
"maps_to": "physiology_cellml_matsuoka_sarai_kuratomi_ono_noma_2003_matsuokasaraikuratomiononoma2003_model.p_ap_na",
"description": "P Ap Na. Maps to source symbol `p_AP_Na`. Units: dimensionless. Naming evidence: source symbol, component, or units provide a direct public name."
},
{
"name": "p_rp_na",
"label": "P Rp Na",
"maps_to": "physiology_cellml_matsuoka_sarai_kuratomi_ono_noma_2003_matsuokasaraikuratomiononoma2003_model.p_rp_na",
"description": "P Rp Na. Maps to source symbol `p_RP_Na`. Units: dimensionless. Naming evidence: source symbol, component, or units provide a direct public name."
},
{
"name": "p_ri_na",
"label": "P Ri Na",
"maps_to": "physiology_cellml_matsuoka_sarai_kuratomi_ono_noma_2003_matsuokasaraikuratomiononoma2003_model.p_ri_na",
"description": "P Ri Na. Maps to source symbol `p_RI_Na`. Units: dimensionless. Naming evidence: source symbol, component, or units provide a direct public name."
},
{
"name": "sodium_current",
"label": "Sodium Current",
"maps_to": "physiology_cellml_matsuoka_sarai_kuratomi_ono_noma_2003_matsuokasaraikuratomiononoma2003_model.sodium_current",
"description": "Sodium Current. Maps to source symbol `i_NaK`. Units: picoA. Naming evidence: source symbol, component, or units provide a direct public name."
},
{
"name": "sodium_current_i_ks_na",
"label": "Sodium Current I Ks Na",
"maps_to": "physiology_cellml_matsuoka_sarai_kuratomi_ono_noma_2003_matsuokasaraikuratomiononoma2003_model.sodium_current_i_ks_na",
"description": "Sodium Current I Ks Na. Maps to source symbol `i_Ks_Na`. Units: picoA. Naming evidence: source symbol, component, or units provide a direct public name."
}
]
},
"title": "Matsuoka2003 - Modelling Roles Individual Current Systems Ventricular Lab",
"models": [
{
"path": "models/core",
"alias": "physiology_cellml_matsuoka_sarai_kuratomi_ono_noma_2003_matsuokasaraikuratomiononoma2003_model",
"parameters": {
"model_path": "data/matsuoka_sarai_kuratomi_ono_noma_2003.cellml",
"integration_step": 0.01
}
},
{
"path": "models/visualisation",
"alias": "visualisation"
}
],
"wiring": [
{
"to": [
"visualisation.physiology_cellml_matsuoka_sarai_kuratomi_ono_noma_2003_matsuokasaraikuratomiononoma2003_model_state"
],
"from": "physiology_cellml_matsuoka_sarai_kuratomi_ono_noma_2003_matsuokasaraikuratomiononoma2003_model.state"
},
{
"to": [
"visualisation.physiology_cellml_matsuoka_sarai_kuratomi_ono_noma_2003_matsuokasaraikuratomiononoma2003_model_summary"
],
"from": "physiology_cellml_matsuoka_sarai_kuratomi_ono_noma_2003_matsuokasaraikuratomiononoma2003_model.summary"
},
{
"to": [
"visualisation.physiology_cellml_matsuoka_sarai_kuratomi_ono_noma_2003_matsuokasaraikuratomiononoma2003_model_trajectory"
],
"from": "physiology_cellml_matsuoka_sarai_kuratomi_ono_noma_2003_matsuokasaraikuratomiononoma2003_model.trajectory"
},
{
"to": [
"visualisation.physiology_cellml_matsuoka_sarai_kuratomi_ono_noma_2003_matsuokasaraikuratomiononoma2003_model_variable_labels"
],
"from": "physiology_cellml_matsuoka_sarai_kuratomi_ono_noma_2003_matsuokasaraikuratomiononoma2003_model.variable_labels"
}
],
"package": "matsuoka2003-modelling-roles-individual-current-systems-b5ac6eb0",
"runtime": {
"duration": 0.01,
"settle_steps": 1,
"initial_inputs": {},
"communication_step": 0.01
},
"version": "1.0.0",
"description": "Source-faithful physiology lab for Matsuoka, Sarai, Kuratomi, Ono, Noma, 2003. Public controls and outputs are mapped to real source symbols for electrophysiology.",
"schema_version": "2.0"
}Runtime
Duration0.01
Comms Step0.01
Settle Steps1
Runs
Total0
Completed0
Failed0
Metadata
Packagematsuoka2003-modelling-roles-individual-current-systems-b5ac6eb0
Created2026-05-23
Updated2026-06-13
physiologycellmlphysiomefaithfulvisualisationother