Physiome 35d - Activation Liver Glycogen Phosphorylase By Oscillations Lab

{
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      {
        "name": "initial_pha",
        "label": "Initial Pha",
        "maps_to": "physiology_cellml_activation_of_the_liver_glycogen_phosphorylase_b_35d_model.initial_pha",
        "description": "Initial value for Pha. Maps to source symbol `Pha`. Units: dimensionless. Naming evidence: source symbol, component, or units provide a direct public name.",
        "accepted_units": [
          "dimensionless"
        ]
      }
    ],
    "outputs": [
      {
        "name": "state",
        "label": "Selected Source State",
        "maps_to": "physiology_cellml_activation_of_the_liver_glycogen_phosphorylase_b_35d_model.state"
      },
      {
        "name": "summary",
        "label": "Simulation Summary",
        "maps_to": "physiology_cellml_activation_of_the_liver_glycogen_phosphorylase_b_35d_model.summary"
      },
      {
        "name": "trajectory",
        "label": "Source Trajectory",
        "maps_to": "physiology_cellml_activation_of_the_liver_glycogen_phosphorylase_b_35d_model.trajectory"
      },
      {
        "name": "variable_labels",
        "label": "Observable Labels",
        "maps_to": "physiology_cellml_activation_of_the_liver_glycogen_phosphorylase_b_35d_model.variable_labels"
      },
      {
        "name": "glucose_concentration",
        "label": "Glucose Concentration",
        "maps_to": "physiology_cellml_activation_of_the_liver_glycogen_phosphorylase_b_35d_model.glucose_concentration",
        "description": "Glucose Concentration. Maps to source symbol `Glc`. Units: micromolar. Naming evidence: source symbol, component, or units provide a direct public name."
      },
      {
        "name": "pha",
        "label": "Pha",
        "maps_to": "physiology_cellml_activation_of_the_liver_glycogen_phosphorylase_b_35d_model.pha",
        "description": "Pha. Maps to source symbol `Pha`. Units: dimensionless. Naming evidence: source symbol, component, or units provide a direct public name."
      },
      {
        "name": "alpha",
        "label": "Alpha",
        "maps_to": "physiology_cellml_activation_of_the_liver_glycogen_phosphorylase_b_35d_model.alpha",
        "description": "Alpha. Maps to source symbol `alpha`. Units: dimensionless. Naming evidence: source symbol, component, or units provide a direct public name."
      },
      {
        "name": "concentration_a",
        "label": "Concentration A (source A)",
        "maps_to": "physiology_cellml_activation_of_the_liver_glycogen_phosphorylase_b_35d_model.concentration_a",
        "description": "Concentration A (source A). Maps to source symbol `A`. Units: micromolar. Naming evidence: amount concentration units identify a concentration state."
      },
      {
        "name": "model_parameter_k_1",
        "label": "Model Parameter K 1 (source K_1)",
        "maps_to": "physiology_cellml_activation_of_the_liver_glycogen_phosphorylase_b_35d_model.model_parameter_k_1",
        "description": "Model Parameter K 1 (source K_1). Maps to source symbol `K_1`. Units: dimensionless. Naming evidence: source symbol is dimensionless but lacks enough evidence for a biological label."
      },
      {
        "name": "model_parameter_k_11",
        "label": "Model Parameter K 11 (source K_11)",
        "maps_to": "physiology_cellml_activation_of_the_liver_glycogen_phosphorylase_b_35d_model.model_parameter_k_11",
        "description": "Model Parameter K 11 (source K_11). Maps to source symbol `K_11`. Units: dimensionless. Naming evidence: source symbol is dimensionless but lacks enough evidence for a biological label."
      }
    ]
  },
  "title": "Physiome 35d - Activation Liver Glycogen Phosphorylase By Oscillations Lab",
  "models": [
    {
      "path": "models/core",
      "alias": "physiology_cellml_activation_of_the_liver_glycogen_phosphorylase_b_35d_model",
      "parameters": {
        "model_path": "data/gall_2000.cellml",
        "integration_step": 0.01
      }
    },
    {
      "path": "models/visualisation",
      "alias": "visualisation"
    }
  ],
  "wiring": [
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    },
    {
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        "visualisation.physiology_cellml_activation_of_the_liver_glycogen_phosphorylase_b_35d_model_summary"
      ],
      "from": "physiology_cellml_activation_of_the_liver_glycogen_phosphorylase_b_35d_model.summary"
    },
    {
      "to": [
        "visualisation.physiology_cellml_activation_of_the_liver_glycogen_phosphorylase_b_35d_model_trajectory"
      ],
      "from": "physiology_cellml_activation_of_the_liver_glycogen_phosphorylase_b_35d_model.trajectory"
    },
    {
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      ],
      "from": "physiology_cellml_activation_of_the_liver_glycogen_phosphorylase_b_35d_model.variable_labels"
    }
  ],
  "package": "physiome35d-activation-liver-glycogen-phosphorylase-by-bd297b31",
  "runtime": {
    "duration": 0.01,
    "settle_steps": 1,
    "initial_inputs": {},
    "communication_step": 0.01
  },
  "version": "1.0.0",
  "description": "Source-faithful physiology lab for Activation of the Liver Glycogen Phosphorylase by Ca2+ Oscillations: a Theoretical Study. Public controls and outputs are mapped to real source symbols for glucose-insulin physiology.",
  "schema_version": "2.0"
}