Hinch2004 - Calcium Dynamics Lab

{
  "io": {
    "inputs": [
      {
        "name": "initial_intracellular_calcium",
        "label": "Initial Intracellular Calcium",
        "maps_to": "physiology_cellml_hinch_greenstein_tanskanen_xu_winslow_2004_hinchgreensteintanskanenxuwinslow2004_model.initial_intracellular_calcium",
        "description": "Initial value for Intracellular Calcium. Maps to source symbol `Ca_i`. Units: mM. Naming evidence: source symbol, component, or units provide a direct public name.",
        "accepted_units": [
          "mM"
        ]
      },
      {
        "name": "initial_ca_sr",
        "label": "Initial Ca Sr",
        "maps_to": "physiology_cellml_hinch_greenstein_tanskanen_xu_winslow_2004_hinchgreensteintanskanenxuwinslow2004_model.initial_ca_sr",
        "description": "Initial value for Ca Sr. Maps to source symbol `Ca_SR`. Units: mM. Naming evidence: source symbol, component, or units provide a direct public name.",
        "accepted_units": [
          "mM"
        ]
      }
    ],
    "outputs": [
      {
        "name": "state",
        "label": "Selected Source State",
        "maps_to": "physiology_cellml_hinch_greenstein_tanskanen_xu_winslow_2004_hinchgreensteintanskanenxuwinslow2004_model.state"
      },
      {
        "name": "summary",
        "label": "Simulation Summary",
        "maps_to": "physiology_cellml_hinch_greenstein_tanskanen_xu_winslow_2004_hinchgreensteintanskanenxuwinslow2004_model.summary"
      },
      {
        "name": "trajectory",
        "label": "Source Trajectory",
        "maps_to": "physiology_cellml_hinch_greenstein_tanskanen_xu_winslow_2004_hinchgreensteintanskanenxuwinslow2004_model.trajectory"
      },
      {
        "name": "variable_labels",
        "label": "Observable Labels",
        "maps_to": "physiology_cellml_hinch_greenstein_tanskanen_xu_winslow_2004_hinchgreensteintanskanenxuwinslow2004_model.variable_labels"
      },
      {
        "name": "membrane_voltage",
        "label": "Membrane Voltage",
        "maps_to": "physiology_cellml_hinch_greenstein_tanskanen_xu_winslow_2004_hinchgreensteintanskanenxuwinslow2004_model.membrane_voltage",
        "description": "Membrane Voltage. Maps to source symbol `V`. Units: mV. Naming evidence: source symbol, component, or units provide a direct public name."
      },
      {
        "name": "calcium_conductance_g_ca_b",
        "label": "Calcium Conductance G Ca B",
        "maps_to": "physiology_cellml_hinch_greenstein_tanskanen_xu_winslow_2004_hinchgreensteintanskanenxuwinslow2004_model.calcium_conductance_g_ca_b",
        "description": "Calcium Conductance G Ca B. Maps to source symbol `g_CaB`. Units: mM_per_mV_ms. Naming evidence: source symbol, component, or units provide a direct public name."
      },
      {
        "name": "calcium_current",
        "label": "Calcium Current",
        "maps_to": "physiology_cellml_hinch_greenstein_tanskanen_xu_winslow_2004_hinchgreensteintanskanenxuwinslow2004_model.calcium_current",
        "description": "Calcium Current. Maps to source symbol `I_pCa`. Units: mM_per_ms. Naming evidence: source symbol, component, or units provide a direct public name."
      },
      {
        "name": "calcium_current_i_ca_b",
        "label": "Calcium Current I Ca B",
        "maps_to": "physiology_cellml_hinch_greenstein_tanskanen_xu_winslow_2004_hinchgreensteintanskanenxuwinslow2004_model.calcium_current_i_ca_b",
        "description": "Calcium Current I Ca B. Maps to source symbol `I_CaB`. Units: mM_per_ms. Naming evidence: source symbol, component, or units provide a direct public name."
      },
      {
        "name": "calcium_reversal_potential",
        "label": "Calcium Reversal Potential",
        "maps_to": "physiology_cellml_hinch_greenstein_tanskanen_xu_winslow_2004_hinchgreensteintanskanenxuwinslow2004_model.calcium_reversal_potential",
        "description": "Calcium Reversal Potential. Maps to source symbol `E_Ca`. Units: mV. Naming evidence: source symbol, component, or units provide a direct public name."
      },
      {
        "name": "intracellular_calcium",
        "label": "Intracellular Calcium",
        "maps_to": "physiology_cellml_hinch_greenstein_tanskanen_xu_winslow_2004_hinchgreensteintanskanenxuwinslow2004_model.intracellular_calcium",
        "description": "Intracellular Calcium. Maps to source symbol `Ca_i`. Units: mM. Naming evidence: source symbol, component, or units provide a direct public name."
      }
    ]
  },
  "title": "Hinch2004 - Calcium Dynamics Lab",
  "models": [
    {
      "path": "models/core",
      "alias": "physiology_cellml_hinch_greenstein_tanskanen_xu_winslow_2004_hinchgreensteintanskanenxuwinslow2004_model",
      "parameters": {
        "model_path": "data/hinch_greenstein_tanskanen_xu_winslow_2004.cellml",
        "integration_step": 0.01
      }
    },
    {
      "path": "models/visualisation",
      "alias": "visualisation"
    }
  ],
  "wiring": [
    {
      "to": [
        "visualisation.physiology_cellml_hinch_greenstein_tanskanen_xu_winslow_2004_hinchgreensteintanskanenxuwinslow2004_model_state"
      ],
      "from": "physiology_cellml_hinch_greenstein_tanskanen_xu_winslow_2004_hinchgreensteintanskanenxuwinslow2004_model.state"
    },
    {
      "to": [
        "visualisation.physiology_cellml_hinch_greenstein_tanskanen_xu_winslow_2004_hinchgreensteintanskanenxuwinslow2004_model_summary"
      ],
      "from": "physiology_cellml_hinch_greenstein_tanskanen_xu_winslow_2004_hinchgreensteintanskanenxuwinslow2004_model.summary"
    },
    {
      "to": [
        "visualisation.physiology_cellml_hinch_greenstein_tanskanen_xu_winslow_2004_hinchgreensteintanskanenxuwinslow2004_model_trajectory"
      ],
      "from": "physiology_cellml_hinch_greenstein_tanskanen_xu_winslow_2004_hinchgreensteintanskanenxuwinslow2004_model.trajectory"
    },
    {
      "to": [
        "visualisation.physiology_cellml_hinch_greenstein_tanskanen_xu_winslow_2004_hinchgreensteintanskanenxuwinslow2004_model_variable_labels"
      ],
      "from": "physiology_cellml_hinch_greenstein_tanskanen_xu_winslow_2004_hinchgreensteintanskanenxuwinslow2004_model.variable_labels"
    }
  ],
  "package": "hinch2004-calcium-dynamics",
  "runtime": {
    "duration": 0.01,
    "settle_steps": 1,
    "initial_inputs": {},
    "communication_step": 0.01
  },
  "version": "1.0.0",
  "description": "Source-faithful physiology lab for Hinch, Greenstein, Tanskanen, Xu, Winslow, 2004. Public controls and outputs are mapped to real source symbols for electrophysiology.",
  "schema_version": "2.0"
}