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Single-model lab wrapper for Ghanbari2020 - forecasting the second wave of COVID-19 in Iran. One of the common misconceptions about COVID-19 disease is to assume that we will not see a recurrence after the first wave of the disease has subsided. It can be used to explore transmission dynamics and compare scenario outcomes across conditions.
Manifest
{
"io": {
"inputs": [
{
"name": "transmission_rate",
"label": "Transmission Rate",
"maps_to": "epidemiology_sbml_ghanbari2020_forecasting_the_second_wave_of_covi_biomd0000000976_model.transmission_rate"
},
{
"name": "weak_immunity_recovery_rate",
"label": "Weak Immunity Recovery Rate",
"maps_to": "epidemiology_sbml_ghanbari2020_forecasting_the_second_wave_of_covi_biomd0000000976_model.weak_immunity_recovery_rate"
},
{
"name": "strong_immunity_recovery_rate",
"label": "Strong Immunity Recovery Rate",
"maps_to": "epidemiology_sbml_ghanbari2020_forecasting_the_second_wave_of_covi_biomd0000000976_model.strong_immunity_recovery_rate"
},
{
"name": "lockdown_start_day",
"label": "Lockdown Start Day",
"maps_to": "epidemiology_sbml_ghanbari2020_forecasting_the_second_wave_of_covi_biomd0000000976_model.lockdown_start_day"
},
{
"name": "lockdown_end_day",
"label": "Lockdown End Day",
"maps_to": "epidemiology_sbml_ghanbari2020_forecasting_the_second_wave_of_covi_biomd0000000976_model.lockdown_end_day"
}
],
"outputs": [
{
"name": "state",
"label": "Model state",
"maps_to": "epidemiology_sbml_ghanbari2020_forecasting_the_second_wave_of_covi_biomd0000000976_model.state"
},
{
"name": "summary",
"label": "Simulation summary",
"maps_to": "epidemiology_sbml_ghanbari2020_forecasting_the_second_wave_of_covi_biomd0000000976_model.summary"
},
{
"name": "species_labels",
"label": "Species labels",
"maps_to": "epidemiology_sbml_ghanbari2020_forecasting_the_second_wave_of_covi_biomd0000000976_model.species_labels"
},
{
"name": "infected_weak_immune_system",
"label": "Infected weak immune system",
"maps_to": "epidemiology_sbml_ghanbari2020_forecasting_the_second_wave_of_covi_biomd0000000976_model.infected_weak_immune_system"
},
{
"name": "infected_strong_immune_system",
"label": "Infected strong immune system",
"maps_to": "epidemiology_sbml_ghanbari2020_forecasting_the_second_wave_of_covi_biomd0000000976_model.infected_strong_immune_system"
},
{
"name": "susceptible",
"label": "Susceptible",
"maps_to": "epidemiology_sbml_ghanbari2020_forecasting_the_second_wave_of_covi_biomd0000000976_model.susceptible"
},
{
"name": "recovered",
"label": "Recovered",
"maps_to": "epidemiology_sbml_ghanbari2020_forecasting_the_second_wave_of_covi_biomd0000000976_model.recovered"
}
]
},
"title": "Ghanbari2020 - forecasting the second wave of COVID-19 in Iran Lab",
"models": [
{
"path": "models/core",
"alias": "epidemiology_sbml_ghanbari2020_forecasting_the_second_wave_of_covi_biomd0000000976_model",
"parameters": {
"model_path": "data/BIOMD0000000976.xml",
"integration_step": 0.1
}
},
{
"path": "models/visualisation",
"alias": "visualisation"
}
],
"wiring": [
{
"to": [
"visualisation.epidemiology_sbml_ghanbari2020_forecasting_the_second_wave_of_covi_biomd0000000976_model_state"
],
"from": "epidemiology_sbml_ghanbari2020_forecasting_the_second_wave_of_covi_biomd0000000976_model.state"
},
{
"to": [
"visualisation.epidemiology_sbml_ghanbari2020_forecasting_the_second_wave_of_covi_biomd0000000976_model_summary"
],
"from": "epidemiology_sbml_ghanbari2020_forecasting_the_second_wave_of_covi_biomd0000000976_model.summary"
},
{
"to": [
"visualisation.epidemiology_sbml_ghanbari2020_forecasting_the_second_wave_of_covi_biomd0000000976_model_species_labels"
],
"from": "epidemiology_sbml_ghanbari2020_forecasting_the_second_wave_of_covi_biomd0000000976_model.species_labels"
}
],
"package": "ghanbari2020-covid-second-wave-iran",
"runtime": {
"duration": 10,
"initial_inputs": {},
"communication_step": 0.1
},
"version": "1.0.0",
"description": "Single-model lab wrapper for Ghanbari2020 - forecasting the second wave of COVID-19 in Iran. One of the common misconceptions about COVID-19 disease is to assume that we will not see a recurrence after the first wave of the disease has subsided. It can be used to explore transmission dynamics and compare scenario outcomes across conditions.",
"schema_version": "2.0"
}Runtime
Duration10
Comms Step0.1
Runs
Total0
Completed0
Failed0
Metadata
Packageghanbari2020-covid-second-wave-iran
Created2026-05-15
Updated2026-06-13
biomodels_ebicuratedepidemiologyfaithfulsbmltelluriumvisualisationother