About lab
One published Lab
Build with this Lab. Run it anywhere.
Use the same immutable release locally or through managed cloud execution, with its exact version and provenance preserved.
Preparing exact examples…
Clean Biosimulant lab for MAPK/ERK receptor signaling. Values are native SBML quantities; equations, parameters, and initial values remain in the bundled source file.
Manifest
{
"io": {
"inputs": [
{
"name": "initial_egf",
"label": "Initial EGF",
"maps_to": "signaling_sbml_schoeberl2002_egf_mapk_biomd0000000019_model.initial_egf",
"description": "Initial level of EGF. Maps to SBML symbol `x1`; exposed as a traceable initial-condition perturbation."
},
{
"name": "initial_t_egf_egfr",
"label": "Initial T EGF EGFR",
"maps_to": "signaling_sbml_schoeberl2002_egf_mapk_biomd0000000019_model.initial_t_egf_egfr",
"description": "Initial level of T EGF EGFR. Maps to SBML symbol `EGF_EGFR_act`; exposed as a traceable initial-condition perturbation."
},
{
"name": "initial_t_erk_pp",
"label": "Initial T ERK PP",
"maps_to": "signaling_sbml_schoeberl2002_egf_mapk_biomd0000000019_model.initial_t_erk_pp",
"description": "Initial level of T ERK PP. Maps to SBML symbol `ERK_PP`; exposed as a traceable initial-condition perturbation."
}
],
"outputs": [
{
"name": "egf_egfri_2_gap_grb2_adapter_protein_sos_guanine_nucleotide_exchange_factor_ras_gdp",
"label": "EGF Egfri 2 GAP Grb2 adapter protein SOS guanine-nucleotide exchange factor RAS GDP",
"maps_to": "signaling_sbml_schoeberl2002_egf_mapk_biomd0000000019_model.egf_egfri_2_gap_grb2_adapter_protein_sos_guanine_nucleotide_exchange_factor_ras_gdp",
"description": "EGF Egfri 2 GAP Grb2 adapter protein SOS guanine-nucleotide exchange factor RAS GDP. Maps to SBML symbol `x20` and is emitted in native SBML units."
},
{
"name": "egf_egfri_2_gap_grb2_adapter_protein_sos_guanine_nucleotide_exchange_factor_ras_gtp",
"label": "EGF Egfri 2 GAP Grb2 adapter protein SOS guanine-nucleotide exchange factor RAS GTP",
"maps_to": "signaling_sbml_schoeberl2002_egf_mapk_biomd0000000019_model.egf_egfri_2_gap_grb2_adapter_protein_sos_guanine_nucleotide_exchange_factor_ras_gtp",
"description": "EGF Egfri 2 GAP Grb2 adapter protein SOS guanine-nucleotide exchange factor RAS GTP. Maps to SBML symbol `x21` and is emitted in native SBML units."
},
{
"name": "ras_gdp",
"label": "RAS GDP",
"maps_to": "signaling_sbml_schoeberl2002_egf_mapk_biomd0000000019_model.ras_gdp",
"description": "RAS GDP. Maps to SBML symbol `x26` and is emitted in native SBML units."
},
{
"name": "state",
"label": "Observable state",
"maps_to": "signaling_sbml_schoeberl2002_egf_mapk_biomd0000000019_model.state"
},
{
"name": "summary",
"label": "Simulation summary",
"maps_to": "signaling_sbml_schoeberl2002_egf_mapk_biomd0000000019_model.summary"
},
{
"name": "species_labels",
"label": "Observable labels",
"maps_to": "signaling_sbml_schoeberl2002_egf_mapk_biomd0000000019_model.species_labels"
}
]
},
"tags": [
"signaling",
"systems",
"systems-biology",
"sbml",
"faithful",
"biomodels_ebi",
"mapk"
],
"title": "Schoeberl2002 - EGF MAPK Lab",
"models": [
{
"path": "models/core",
"alias": "signaling_sbml_schoeberl2002_egf_mapk_biomd0000000019_model"
},
{
"path": "models/visualisation",
"alias": "visualisation"
}
],
"wiring": [
{
"to": [
"visualisation.signaling_sbml_schoeberl2002_egf_mapk_biomd0000000019_model_state"
],
"from": "signaling_sbml_schoeberl2002_egf_mapk_biomd0000000019_model.state"
},
{
"to": [
"visualisation.signaling_sbml_schoeberl2002_egf_mapk_biomd0000000019_model_summary"
],
"from": "signaling_sbml_schoeberl2002_egf_mapk_biomd0000000019_model.summary"
},
{
"to": [
"visualisation.signaling_sbml_schoeberl2002_egf_mapk_biomd0000000019_model_species_labels"
],
"from": "signaling_sbml_schoeberl2002_egf_mapk_biomd0000000019_model.species_labels"
}
],
"package": "schoeberl2002-egf-mapk",
"runtime": {
"duration": 1,
"initial_inputs": {},
"communication_step": 0.1
},
"version": "1.0.0",
"description": "Clean Biosimulant lab for MAPK/ERK receptor signaling. Values are native SBML quantities; equations, parameters, and initial values remain in the bundled source file.",
"schema_version": "2.0"
}Runtime
Duration1
Comms Step0.1
Runs
Total0
Completed0
Failed0
Metadata
Packageschoeberl2002-egf-mapk
Created2026-05-16
Updated2026-06-13
signalingsystemssystems-biologysbmlfaithfulbiomodels_ebimapkvisualisationother