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Single-model lab wrapper for Novak1998-Model scenarios for evolution of the eukaryotic cell cycle.. Progress through the division cycle of present day eukaryotic cells is controlled by a complex network consisting of (i) cyclin-dependent kinases (CDKs) and their associated cyclins, (ii) kinases and. It can be used to explore cell-cycle regulation dynamics and compare checkpoint behavior across conditions.
Manifest
{
"io": {
"inputs": [],
"outputs": [
{
"name": "cyclin_dependent_kinase_activity",
"label": "Cyclin-dependent kinase activity",
"maps_to": "cellcycle_sbml_novak1998_model_scenarios_for_evolution_of_the_e_model2005040001_model.cyclin_dependent_kinase_activity",
"description": "Tracks Cyclin-dependent kinase activity in the lab model via `cellcycle_sbml_novak1998_model_scenarios_for_evolution_of_the_e_model2005040001_model.cyclin_dependent_kinase_activity`."
},
{
"name": "apc_c_c",
"label": "APC/C/C",
"maps_to": "cellcycle_sbml_novak1998_model_scenarios_for_evolution_of_the_e_model2005040001_model.apc_c_c",
"description": "Tracks APC/C/C in the lab model via `cellcycle_sbml_novak1998_model_scenarios_for_evolution_of_the_e_model2005040001_model.apc_c_c`."
},
{
"name": "size",
"label": "Size",
"maps_to": "cellcycle_sbml_novak1998_model_scenarios_for_evolution_of_the_e_model2005040001_model.size",
"description": "Tracks Size in the lab model via `cellcycle_sbml_novak1998_model_scenarios_for_evolution_of_the_e_model2005040001_model.size`."
},
{
"name": "total_active_regulatory_state",
"label": "Total active regulatory state",
"maps_to": "cellcycle_sbml_novak1998_model_scenarios_for_evolution_of_the_e_model2005040001_model.total_active_regulatory_state",
"description": "Tracks Total active regulatory state in the lab model via `cellcycle_sbml_novak1998_model_scenarios_for_evolution_of_the_e_model2005040001_model.total_active_regulatory_state`."
},
{
"name": "active_regulatory_state",
"label": "Active regulatory state",
"maps_to": "cellcycle_sbml_novak1998_model_scenarios_for_evolution_of_the_e_model2005040001_model.active_regulatory_state",
"description": "Tracks Active regulatory state in the lab model via `cellcycle_sbml_novak1998_model_scenarios_for_evolution_of_the_e_model2005040001_model.active_regulatory_state`."
},
{
"name": "cyclin_dependent_kinase_inhibitor",
"label": "Cyclin-dependent kinase inhibitor",
"maps_to": "cellcycle_sbml_novak1998_model_scenarios_for_evolution_of_the_e_model2005040001_model.cyclin_dependent_kinase_inhibitor",
"description": "Tracks Cyclin-dependent kinase inhibitor in the lab model via `cellcycle_sbml_novak1998_model_scenarios_for_evolution_of_the_e_model2005040001_model.cyclin_dependent_kinase_inhibitor`."
},
{
"name": "trimer_complex",
"label": "Trimer complex",
"maps_to": "cellcycle_sbml_novak1998_model_scenarios_for_evolution_of_the_e_model2005040001_model.trimer_complex",
"description": "Tracks Trimer complex in the lab model via `cellcycle_sbml_novak1998_model_scenarios_for_evolution_of_the_e_model2005040001_model.trimer_complex`."
}
]
},
"title": "Novak1998-Model scenarios for evolution of the eukaryotic cell cycle. Lab",
"models": [
{
"path": "models/core",
"alias": "cellcycle_sbml_novak1998_model_scenarios_for_evolution_of_the_e_model2005040001_model"
},
{
"path": "models/visualisation",
"alias": "visualisation"
}
],
"wiring": [
{
"to": [
"visualisation.cellcycle_sbml_novak1998_model_scenarios_for_evolution_of_the_e_model2005040001_model_state"
],
"from": "cellcycle_sbml_novak1998_model_scenarios_for_evolution_of_the_e_model2005040001_model.state"
},
{
"to": [
"visualisation.cellcycle_sbml_novak1998_model_scenarios_for_evolution_of_the_e_model2005040001_model_summary"
],
"from": "cellcycle_sbml_novak1998_model_scenarios_for_evolution_of_the_e_model2005040001_model.summary"
},
{
"to": [
"visualisation.cellcycle_sbml_novak1998_model_scenarios_for_evolution_of_the_e_model2005040001_model_species_labels"
],
"from": "cellcycle_sbml_novak1998_model_scenarios_for_evolution_of_the_e_model2005040001_model.species_labels"
}
],
"package": "novak1998-eukaryotic-cycle-evolution",
"runtime": {
"duration": 10,
"initial_inputs": {},
"communication_step": 1
},
"version": "1.0.0",
"description": "Single-model lab wrapper for Novak1998-Model scenarios for evolution of the eukaryotic cell cycle.. Progress through the division cycle of present day eukaryotic cells is controlled by a complex network consisting of (i) cyclin-dependent kinases (CDKs) and their associated cyclins, (ii) kinases and. It can be used to explore cell-cycle regulation dynamics and compare checkpoint behavior across conditions.",
"schema_version": "2.0"
}Runtime
Duration10
Comms Step1
Runs
Total0
Completed0
Failed0
Metadata
Packagenovak1998-eukaryotic-cycle-evolution
Created2026-05-15
Updated2026-06-13
cellcyclesbmlbiomodels_ebifaithfulvisualisationother