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Single-model lab wrapper for Liu2017 - Dynamics of Avian Influenza with Allee Growth Effect. Sanhong Liu, Shigui Ruan & Xinan Zhang. It can be used to explore transmission dynamics and compare scenario outcomes across conditions.
Manifest
{
"io": {
"inputs": [
{
"name": "recovery_rate",
"label": "Recovery Rate",
"maps_to": "epidemiology_sbml_liu2017_dynamics_of_avian_influenza_with_allee_g_biomd0000000709_model.recovery_rate"
}
],
"outputs": [
{
"name": "state",
"label": "Model state",
"maps_to": "epidemiology_sbml_liu2017_dynamics_of_avian_influenza_with_allee_g_biomd0000000709_model.state"
},
{
"name": "summary",
"label": "Simulation summary",
"maps_to": "epidemiology_sbml_liu2017_dynamics_of_avian_influenza_with_allee_g_biomd0000000709_model.summary"
},
{
"name": "species_labels",
"label": "Species labels",
"maps_to": "epidemiology_sbml_liu2017_dynamics_of_avian_influenza_with_allee_g_biomd0000000709_model.species_labels"
},
{
"name": "infected_avian_i_a",
"label": "Infected Avian (I a)",
"maps_to": "epidemiology_sbml_liu2017_dynamics_of_avian_influenza_with_allee_g_biomd0000000709_model.infected_avian_i_a"
},
{
"name": "susceptible_avian_s_a",
"label": "Susceptible Avian (S a)",
"maps_to": "epidemiology_sbml_liu2017_dynamics_of_avian_influenza_with_allee_g_biomd0000000709_model.susceptible_avian_s_a"
},
{
"name": "infected_human_i_h",
"label": "Infected Human (I h)",
"maps_to": "epidemiology_sbml_liu2017_dynamics_of_avian_influenza_with_allee_g_biomd0000000709_model.infected_human_i_h"
},
{
"name": "susceptible_human_s_h",
"label": "Susceptible Human (S h)",
"maps_to": "epidemiology_sbml_liu2017_dynamics_of_avian_influenza_with_allee_g_biomd0000000709_model.susceptible_human_s_h"
},
{
"name": "recovered_human_r_h",
"label": "Recovered Human (R h)",
"maps_to": "epidemiology_sbml_liu2017_dynamics_of_avian_influenza_with_allee_g_biomd0000000709_model.recovered_human_r_h"
}
]
},
"title": "Liu2017 - Dynamics of Avian Influenza with Allee Growth Effect Lab",
"models": [
{
"path": "models/core",
"alias": "epidemiology_sbml_liu2017_dynamics_of_avian_influenza_with_allee_g_biomd0000000709_model",
"parameters": {
"model_path": "data/BIOMD0000000709.xml",
"integration_step": 0.1
}
},
{
"path": "models/visualisation",
"alias": "visualisation"
}
],
"wiring": [
{
"to": [
"visualisation.epidemiology_sbml_liu2017_dynamics_of_avian_influenza_with_allee_g_biomd0000000709_model_state"
],
"from": "epidemiology_sbml_liu2017_dynamics_of_avian_influenza_with_allee_g_biomd0000000709_model.state"
},
{
"to": [
"visualisation.epidemiology_sbml_liu2017_dynamics_of_avian_influenza_with_allee_g_biomd0000000709_model_summary"
],
"from": "epidemiology_sbml_liu2017_dynamics_of_avian_influenza_with_allee_g_biomd0000000709_model.summary"
},
{
"to": [
"visualisation.epidemiology_sbml_liu2017_dynamics_of_avian_influenza_with_allee_g_biomd0000000709_model_species_labels"
],
"from": "epidemiology_sbml_liu2017_dynamics_of_avian_influenza_with_allee_g_biomd0000000709_model.species_labels"
}
],
"package": "liu2017-avian-influenza-allee-growth",
"runtime": {
"duration": 10,
"initial_inputs": {},
"communication_step": 0.1
},
"version": "1.0.0",
"description": "Single-model lab wrapper for Liu2017 - Dynamics of Avian Influenza with Allee Growth Effect. Sanhong Liu, Shigui Ruan & Xinan Zhang. It can be used to explore transmission dynamics and compare scenario outcomes across conditions.",
"schema_version": "2.0"
}Runtime
Duration10
Comms Step0.1
Runs
Total0
Completed0
Failed0
Metadata
Packageliu2017-avian-influenza-allee-growth
Created2026-05-15
Updated2026-06-13
biomodels_ebicuratedepidemiologyfaithfulsbmltelluriumvisualisationother