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Source-faithful physiology lab for Bhalla, Iyengar, 1999. Public controls and outputs are mapped to real source symbols for calcium handling.
Manifest
{
"io": {
"inputs": [
{
"name": "initial_inositol_trisphosphate",
"label": "Initial Inositol Trisphosphate",
"maps_to": "physiology_cellml_bhalla_iyengar_1999_bhallaiyengar1999_model.initial_inositol_trisphosphate",
"description": "Initial value for Inositol Trisphosphate. Maps to source symbol `IP3`. Units: um. Naming evidence: source symbol, component, or units provide a direct public name.",
"accepted_units": [
"um"
]
},
{
"name": "initial_aadagpkc",
"label": "Initial Aadagpkc",
"maps_to": "physiology_cellml_bhalla_iyengar_1999_bhallaiyengar1999_model.initial_aadagpkc",
"description": "Initial value for Aadagpkc. Maps to source symbol `AADAGPKC`. Units: um. Naming evidence: source symbol, component, or units provide a direct public name.",
"accepted_units": [
"um"
]
}
],
"outputs": [
{
"name": "state",
"label": "Selected Source State",
"maps_to": "physiology_cellml_bhalla_iyengar_1999_bhallaiyengar1999_model.state"
},
{
"name": "summary",
"label": "Simulation Summary",
"maps_to": "physiology_cellml_bhalla_iyengar_1999_bhallaiyengar1999_model.summary"
},
{
"name": "trajectory",
"label": "Source Trajectory",
"maps_to": "physiology_cellml_bhalla_iyengar_1999_bhallaiyengar1999_model.trajectory"
},
{
"name": "variable_labels",
"label": "Observable Labels",
"maps_to": "physiology_cellml_bhalla_iyengar_1999_bhallaiyengar1999_model.variable_labels"
},
{
"name": "inositol_trisphosphate",
"label": "Inositol Trisphosphate",
"maps_to": "physiology_cellml_bhalla_iyengar_1999_bhallaiyengar1999_model.inositol_trisphosphate",
"description": "Inositol Trisphosphate. Maps to source symbol `IP3`. Units: um. Naming evidence: source symbol, component, or units provide a direct public name."
},
{
"name": "aadagpkc",
"label": "Aadagpkc",
"maps_to": "physiology_cellml_bhalla_iyengar_1999_bhallaiyengar1999_model.aadagpkc",
"description": "Aadagpkc. Maps to source symbol `AADAGPKC`. Units: um. Naming evidence: source symbol, component, or units provide a direct public name."
},
{
"name": "apc",
"label": "Apc",
"maps_to": "physiology_cellml_bhalla_iyengar_1999_bhallaiyengar1999_model.apc",
"description": "Apc. Maps to source symbol `APC`. Units: um. Naming evidence: source symbol, component, or units provide a direct public name."
},
{
"name": "ca_pkc",
"label": "Ca Pkc",
"maps_to": "physiology_cellml_bhalla_iyengar_1999_bhallaiyengar1999_model.ca_pkc",
"description": "Ca Pkc. Maps to source symbol `CaPKC`. Units: um. Naming evidence: source symbol, component, or units provide a direct public name."
},
{
"name": "ca_pla2",
"label": "Ca Pla2",
"maps_to": "physiology_cellml_bhalla_iyengar_1999_bhallaiyengar1999_model.ca_pla2",
"description": "Ca Pla2. Maps to source symbol `CaPLA2`. Units: um. Naming evidence: source symbol, component, or units provide a direct public name."
},
{
"name": "ca_pla2_star",
"label": "Ca Pla2 Star",
"maps_to": "physiology_cellml_bhalla_iyengar_1999_bhallaiyengar1999_model.ca_pla2_star",
"description": "Ca Pla2 Star. Maps to source symbol `CaPLA2_star`. Units: um. Naming evidence: source symbol, component, or units provide a direct public name."
}
]
},
"title": "Bhalla1999 - Complete Network Iyengar Lab",
"models": [
{
"path": "models/core",
"alias": "physiology_cellml_bhalla_iyengar_1999_bhallaiyengar1999_model",
"parameters": {
"model_path": "data/bhalla_iyengar_1999_a.cellml",
"integration_step": 0.01
}
},
{
"path": "models/visualisation",
"alias": "visualisation"
}
],
"wiring": [
{
"to": [
"visualisation.physiology_cellml_bhalla_iyengar_1999_bhallaiyengar1999_model_state"
],
"from": "physiology_cellml_bhalla_iyengar_1999_bhallaiyengar1999_model.state"
},
{
"to": [
"visualisation.physiology_cellml_bhalla_iyengar_1999_bhallaiyengar1999_model_summary"
],
"from": "physiology_cellml_bhalla_iyengar_1999_bhallaiyengar1999_model.summary"
},
{
"to": [
"visualisation.physiology_cellml_bhalla_iyengar_1999_bhallaiyengar1999_model_trajectory"
],
"from": "physiology_cellml_bhalla_iyengar_1999_bhallaiyengar1999_model.trajectory"
},
{
"to": [
"visualisation.physiology_cellml_bhalla_iyengar_1999_bhallaiyengar1999_model_variable_labels"
],
"from": "physiology_cellml_bhalla_iyengar_1999_bhallaiyengar1999_model.variable_labels"
}
],
"package": "bhalla1999-complete-network-iyengar",
"runtime": {
"duration": 0.01,
"settle_steps": 1,
"initial_inputs": {},
"communication_step": 0.01
},
"version": "1.0.0",
"description": "Source-faithful physiology lab for Bhalla, Iyengar, 1999. Public controls and outputs are mapped to real source symbols for calcium handling.",
"schema_version": "2.0"
}Runtime
Duration0.01
Comms Step0.01
Settle Steps1
Runs
Total0
Completed0
Failed0
Metadata
Packagebhalla1999-complete-network-iyengar
Created2026-05-23
Updated2026-06-13
physiologycellmlphysiomefaithfulvisualisationother