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<notes xmlns="http://www.sbml.org/sbml/level2/version4"> <body xmlns="http://www.w3.org/1999/xhtml"> <pre>PI cycle Core Model Global Quantities = free + bound PL. It can be used to explore systemsbiology mazet2020 of the pi cycle dynamics and compare simulation behavior across conditions.
Manifest
{
"io": {
"inputs": [
{
"name": "initial_pi4_p_p4_bp",
"label": "Initial PI4 P P4 Bp",
"maps_to": "systemsbiology_sbml_mazet2020_model_of_the_pi_cycle_model2006300001_model.initial_pi4_p_p4_bp",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `PI4P_P4BP`."
},
{
"name": "initial_pip2_plb",
"label": "Initial Pip2 Plb",
"maps_to": "systemsbiology_sbml_mazet2020_model_of_the_pi_cycle_model2006300001_model.initial_pip2_plb",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `PIP2_PLB`."
},
{
"name": "initial_pa_pabp",
"label": "Initial Pa Pabp",
"maps_to": "systemsbiology_sbml_mazet2020_model_of_the_pi_cycle_model2006300001_model.initial_pa_pabp",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `PA_PABP`."
},
{
"name": "initial_dag_bp",
"label": "Initial Dag Bp",
"maps_to": "systemsbiology_sbml_mazet2020_model_of_the_pi_cycle_model2006300001_model.initial_dag_bp",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `DAG_BP`."
},
{
"name": "initial_sm_g",
"label": "Initial Sm G",
"maps_to": "systemsbiology_sbml_mazet2020_model_of_the_pi_cycle_model2006300001_model.initial_sm_g",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `smG`."
},
{
"name": "initial_sm_ga",
"label": "Initial Sm Ga",
"maps_to": "systemsbiology_sbml_mazet2020_model_of_the_pi_cycle_model2006300001_model.initial_sm_ga",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `smGa`."
}
],
"outputs": [
{
"name": "state",
"maps_to": "systemsbiology_sbml_mazet2020_model_of_the_pi_cycle_model2006300001_model.state"
},
{
"name": "summary",
"maps_to": "systemsbiology_sbml_mazet2020_model_of_the_pi_cycle_model2006300001_model.summary"
},
{
"name": "species_labels",
"maps_to": "systemsbiology_sbml_mazet2020_model_of_the_pi_cycle_model2006300001_model.species_labels"
},
{
"name": "pi4_p_p4_bp",
"maps_to": "systemsbiology_sbml_mazet2020_model_of_the_pi_cycle_model2006300001_model.pi4_p_p4_bp"
},
{
"name": "pip2_plb",
"maps_to": "systemsbiology_sbml_mazet2020_model_of_the_pi_cycle_model2006300001_model.pip2_plb"
},
{
"name": "pa_pabp",
"maps_to": "systemsbiology_sbml_mazet2020_model_of_the_pi_cycle_model2006300001_model.pa_pabp"
},
{
"name": "dag_bp",
"maps_to": "systemsbiology_sbml_mazet2020_model_of_the_pi_cycle_model2006300001_model.dag_bp"
},
{
"name": "sm_g",
"maps_to": "systemsbiology_sbml_mazet2020_model_of_the_pi_cycle_model2006300001_model.sm_g"
},
{
"name": "sm_ga",
"maps_to": "systemsbiology_sbml_mazet2020_model_of_the_pi_cycle_model2006300001_model.sm_ga"
}
]
},
"tags": [
"systemsbiology",
"sbml",
"biomodels_ebi",
"faithful",
"curated"
],
"title": "Mazet2020 Model Of The Pi Cycle Lab",
"models": [
{
"path": "models/core",
"alias": "systemsbiology_sbml_mazet2020_model_of_the_pi_cycle_model2006300001_model"
},
{
"path": "models/visualisation",
"alias": "visualisation"
}
],
"wiring": [
{
"to": [
"visualisation.systemsbiology_sbml_mazet2020_model_of_the_pi_cycle_model2006300001_model_state"
],
"from": "systemsbiology_sbml_mazet2020_model_of_the_pi_cycle_model2006300001_model.state"
},
{
"to": [
"visualisation.systemsbiology_sbml_mazet2020_model_of_the_pi_cycle_model2006300001_model_summary"
],
"from": "systemsbiology_sbml_mazet2020_model_of_the_pi_cycle_model2006300001_model.summary"
},
{
"to": [
"visualisation.systemsbiology_sbml_mazet2020_model_of_the_pi_cycle_model2006300001_model_species_labels"
],
"from": "systemsbiology_sbml_mazet2020_model_of_the_pi_cycle_model2006300001_model.species_labels"
}
],
"package": "mazet2020-model-of-the-pi-cycle",
"runtime": {
"duration": 1,
"initial_inputs": {},
"communication_step": 0.1
},
"version": "1.0.0",
"description": "<notes xmlns="http://www.sbml.org/sbml/level2/version4"> <body xmlns="http://www.w3.org/1999/xhtml"> <pre>PI cycle Core Model Global Quantities = free + bound PL. It can be used to explore systemsbiology mazet2020 of the pi cycle dynamics and compare simulation behavior across conditions.",
"schema_version": "2.0"
}Runtime
Duration1
Comms Step0.1
Runs
Total0
Completed0
Failed0
Metadata
Packagemazet2020-model-of-the-pi-cycle
Created2026-06-13
Updated2026-06-13
systemsbiologysbmlbiomodels_ebifaithfulcuratedvisualisationother