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Source-faithful physiology lab for Wolf, Heinrich, 2000. Public controls and outputs are mapped to real source symbols for glucose-insulin physiology.
Manifest
{
"io": {
"inputs": [
{
"name": "initial_atp",
"label": "Initial ATP",
"maps_to": "physiology_cellml_wolf_heinrich_2000_wolfheinrich2000_model.initial_atp",
"description": "Initial value for ATP. Maps to source symbol `A3`. Units: millimolar. Naming evidence: source metadata names `A3` as `ATP`.",
"accepted_units": [
"millimolar"
]
},
{
"name": "initial_glucose",
"label": "Initial Glucose",
"maps_to": "physiology_cellml_wolf_heinrich_2000_wolfheinrich2000_model.initial_glucose",
"description": "Initial value for Glucose. Maps to source symbol `S1`. Units: millimolar. Naming evidence: source metadata names `S1` as `glucose`.",
"accepted_units": [
"millimolar"
]
}
],
"outputs": [
{
"name": "state",
"label": "Selected Source State",
"maps_to": "physiology_cellml_wolf_heinrich_2000_wolfheinrich2000_model.state"
},
{
"name": "summary",
"label": "Simulation Summary",
"maps_to": "physiology_cellml_wolf_heinrich_2000_wolfheinrich2000_model.summary"
},
{
"name": "trajectory",
"label": "Source Trajectory",
"maps_to": "physiology_cellml_wolf_heinrich_2000_wolfheinrich2000_model.trajectory"
},
{
"name": "variable_labels",
"label": "Observable Labels",
"maps_to": "physiology_cellml_wolf_heinrich_2000_wolfheinrich2000_model.variable_labels"
},
{
"name": "atp",
"label": "ATP",
"maps_to": "physiology_cellml_wolf_heinrich_2000_wolfheinrich2000_model.atp",
"description": "ATP. Maps to source symbol `A3`. Units: millimolar. Naming evidence: source metadata names `A3` as `ATP`."
},
{
"name": "kappa",
"label": "Kappa",
"maps_to": "physiology_cellml_wolf_heinrich_2000_wolfheinrich2000_model.kappa",
"description": "Kappa. Maps to source symbol `kappa`. Units: first_order_rate_constant. Naming evidence: source symbol, component, or units provide a direct public name."
},
{
"name": "s4_flux_rate_across_the_plasma_membrane_j",
"label": "S4 Flux Rate Across The Plasma Membrane J",
"maps_to": "physiology_cellml_wolf_heinrich_2000_wolfheinrich2000_model.s4_flux_rate_across_the_plasma_membrane_j",
"description": "S4 Flux Rate Across The Plasma Membrane J. Maps to source symbol `J`. Units: flux. Naming evidence: source symbol, component, or units provide a direct public name."
},
{
"name": "glucose_influx_rate_jo",
"label": "Glucose Influx Rate Jo",
"maps_to": "physiology_cellml_wolf_heinrich_2000_wolfheinrich2000_model.glucose_influx_rate_jo",
"description": "Glucose Influx Rate Jo. Maps to source symbol `Jo`. Units: flux. Naming evidence: source symbol, component, or units provide a direct public name."
},
{
"name": "glucose",
"label": "Glucose",
"maps_to": "physiology_cellml_wolf_heinrich_2000_wolfheinrich2000_model.glucose",
"description": "Glucose. Maps to source symbol `S1`. Units: millimolar. Naming evidence: source metadata names `S1` as `glucose`."
},
{
"name": "nadh",
"label": "Nadh",
"maps_to": "physiology_cellml_wolf_heinrich_2000_wolfheinrich2000_model.nadh",
"description": "Nadh. Maps to source symbol `N2`. Units: millimolar. Naming evidence: source metadata names `N2` as `NADH`."
}
]
},
"title": "Wolf2000 - Effect Cellular Interaction Glycolytic Oscillations Yeast Lab",
"models": [
{
"path": "models/core",
"alias": "physiology_cellml_wolf_heinrich_2000_wolfheinrich2000_model",
"parameters": {
"model_path": "data/wolf_heinrich_2000.cellml",
"integration_step": 0.01
}
},
{
"path": "models/visualisation",
"alias": "visualisation"
}
],
"wiring": [
{
"to": [
"visualisation.physiology_cellml_wolf_heinrich_2000_wolfheinrich2000_model_state"
],
"from": "physiology_cellml_wolf_heinrich_2000_wolfheinrich2000_model.state"
},
{
"to": [
"visualisation.physiology_cellml_wolf_heinrich_2000_wolfheinrich2000_model_summary"
],
"from": "physiology_cellml_wolf_heinrich_2000_wolfheinrich2000_model.summary"
},
{
"to": [
"visualisation.physiology_cellml_wolf_heinrich_2000_wolfheinrich2000_model_trajectory"
],
"from": "physiology_cellml_wolf_heinrich_2000_wolfheinrich2000_model.trajectory"
},
{
"to": [
"visualisation.physiology_cellml_wolf_heinrich_2000_wolfheinrich2000_model_variable_labels"
],
"from": "physiology_cellml_wolf_heinrich_2000_wolfheinrich2000_model.variable_labels"
}
],
"package": "wolf2000-effect-cellular-interaction-glycolytic-oscilla-81f39042",
"runtime": {
"duration": 0.01,
"settle_steps": 1,
"initial_inputs": {},
"communication_step": 0.01
},
"version": "1.0.0",
"description": "Source-faithful physiology lab for Wolf, Heinrich, 2000. Public controls and outputs are mapped to real source symbols for glucose-insulin physiology.",
"schema_version": "2.0"
}Runtime
Duration0.01
Comms Step0.01
Settle Steps1
Runs
Total0
Completed0
Failed0
Metadata
Packagewolf2000-effect-cellular-interaction-glycolytic-oscilla-81f39042
Created2026-05-23
Updated2026-06-13
physiologycellmlphysiomefaithfulvisualisationother