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Single-model lab wrapper for Model-based prediction of SARS-CoV-2 in Ethiopia: Extended SEIR model. One of three models used to describe dynamics of COVID-19 spread in Ethiopia. Here the two investigated population groups healthcare workers and community members are modeled as separate but interacti.
Manifest
{
"io": {
"inputs": [
{
"name": "community_transmission_rate",
"label": "Community Transmission Rate",
"maps_to": "epidemiology_sbml_model_based_prediction_of_sars_cov_2_in_ethiopia_model2212310001_model.community_transmission_rate"
},
{
"name": "incubation_period",
"label": "Incubation Period",
"maps_to": "epidemiology_sbml_model_based_prediction_of_sars_cov_2_in_ethiopia_model2212310001_model.incubation_period"
},
{
"name": "recovery_period",
"label": "Recovery Period",
"maps_to": "epidemiology_sbml_model_based_prediction_of_sars_cov_2_in_ethiopia_model2212310001_model.recovery_period"
},
{
"name": "initial_infected",
"label": "Initial Infected",
"maps_to": "epidemiology_sbml_model_based_prediction_of_sars_cov_2_in_ethiopia_model2212310001_model.initial_infected"
}
],
"outputs": [
{
"name": "state",
"label": "Model state",
"maps_to": "epidemiology_sbml_model_based_prediction_of_sars_cov_2_in_ethiopia_model2212310001_model.state"
},
{
"name": "summary",
"label": "Simulation summary",
"maps_to": "epidemiology_sbml_model_based_prediction_of_sars_cov_2_in_ethiopia_model2212310001_model.summary"
},
{
"name": "species_labels",
"label": "Species labels",
"maps_to": "epidemiology_sbml_model_based_prediction_of_sars_cov_2_in_ethiopia_model2212310001_model.species_labels"
},
{
"name": "susceptible_community",
"label": "Susceptible community",
"maps_to": "epidemiology_sbml_model_based_prediction_of_sars_cov_2_in_ethiopia_model2212310001_model.susceptible_community"
},
{
"name": "exposed_community",
"label": "Exposed community",
"maps_to": "epidemiology_sbml_model_based_prediction_of_sars_cov_2_in_ethiopia_model2212310001_model.exposed_community"
},
{
"name": "infected_community",
"label": "Infected community",
"maps_to": "epidemiology_sbml_model_based_prediction_of_sars_cov_2_in_ethiopia_model2212310001_model.infected_community"
},
{
"name": "recovered_community",
"label": "Recovered community",
"maps_to": "epidemiology_sbml_model_based_prediction_of_sars_cov_2_in_ethiopia_model2212310001_model.recovered_community"
},
{
"name": "susceptible_healthcare_workers",
"label": "Susceptible healthcare workers",
"maps_to": "epidemiology_sbml_model_based_prediction_of_sars_cov_2_in_ethiopia_model2212310001_model.susceptible_healthcare_workers"
},
{
"name": "exposed_healthcare_workers",
"label": "Exposed healthcare workers",
"maps_to": "epidemiology_sbml_model_based_prediction_of_sars_cov_2_in_ethiopia_model2212310001_model.exposed_healthcare_workers"
},
{
"name": "infected_healthcare_workers",
"label": "Infected healthcare workers",
"maps_to": "epidemiology_sbml_model_based_prediction_of_sars_cov_2_in_ethiopia_model2212310001_model.infected_healthcare_workers"
},
{
"name": "recovered_healthcare_workers",
"label": "Recovered healthcare workers",
"maps_to": "epidemiology_sbml_model_based_prediction_of_sars_cov_2_in_ethiopia_model2212310001_model.recovered_healthcare_workers"
}
]
},
"title": "Model-based prediction of SARS-CoV-2 in Ethiopia: Extended SEIR model Lab",
"models": [
{
"path": "models/core",
"alias": "epidemiology_sbml_model_based_prediction_of_sars_cov_2_in_ethiopia_model2212310001_model",
"parameters": {
"model_path": "data/MODEL2212310001.sbml",
"integration_step": 0.1
}
},
{
"path": "models/visualisation",
"alias": "visualisation"
}
],
"wiring": [
{
"to": [
"visualisation.epidemiology_sbml_model_based_prediction_of_sars_cov_2_in_ethiopia_model2212310001_model_state"
],
"from": "epidemiology_sbml_model_based_prediction_of_sars_cov_2_in_ethiopia_model2212310001_model.state"
},
{
"to": [
"visualisation.epidemiology_sbml_model_based_prediction_of_sars_cov_2_in_ethiopia_model2212310001_model_summary"
],
"from": "epidemiology_sbml_model_based_prediction_of_sars_cov_2_in_ethiopia_model2212310001_model.summary"
},
{
"to": [
"visualisation.epidemiology_sbml_model_based_prediction_of_sars_cov_2_in_ethiopia_model2212310001_model_species_labels"
],
"from": "epidemiology_sbml_model_based_prediction_of_sars_cov_2_in_ethiopia_model2212310001_model.species_labels"
}
],
"package": "ethiopia2022-sars-cov2-extended-seir",
"runtime": {
"duration": 10,
"initial_inputs": {},
"communication_step": 0.1
},
"version": "1.0.0",
"description": "Single-model lab wrapper for Model-based prediction of SARS-CoV-2 in Ethiopia: Extended SEIR model. One of three models used to describe dynamics of COVID-19 spread in Ethiopia. Here the two investigated population groups healthcare workers and community members are modeled as separate but interacti.",
"schema_version": "2.0"
}Runtime
Duration10
Comms Step0.1
Runs
Total0
Completed0
Failed0
Metadata
Packageethiopia2022-sars-cov2-extended-seir
Created2026-05-15
Updated2026-06-13
biomodels_ebicuratedepidemiologyfaithfulsbmltelluriumvisualisationother