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Clean Biosimulant lab for systems signaling model: Mosbacher2022 - Yeast HOG pathway. Values are native SBML quantities; equations, parameters, and initial values remain in the bundled source file.
Manifest
{
"io": {
"inputs": [
{
"name": "initial_heximide_factor_level",
"label": "Heximide Factor",
"maps_to": "signaling_sbml_mosbacher2022_yeast_hog_pathway_model2206230001_model.initial_heximide_factor_level",
"description": "Heximide Factor source parameter. Maps to SBML symbol `heximide_factor` and preserves the bundled default."
},
{
"name": "initial_macia_factor_level",
"label": "Macia Factor",
"maps_to": "signaling_sbml_mosbacher2022_yeast_hog_pathway_model2206230001_model.initial_macia_factor_level",
"description": "Macia Factor source parameter. Maps to SBML symbol `macia_factor` and preserves the bundled default."
},
{
"name": "initial_ptp2_factor_level",
"label": "Ptp2 Factor",
"maps_to": "signaling_sbml_mosbacher2022_yeast_hog_pathway_model2206230001_model.initial_ptp2_factor_level",
"description": "Ptp2 Factor source parameter. Maps to SBML symbol `Ptp2_factor` and preserves the bundled default."
}
],
"outputs": [
{
"name": "sln1_phosphorylated",
"label": "Sln1 Phosphorylated",
"maps_to": "signaling_sbml_mosbacher2022_yeast_hog_pathway_model2206230001_model.sln1_phosphorylated",
"description": "Sln1 Phosphorylated. Maps to SBML symbol `Sln1_phosphorylated` and is emitted in native SBML units."
},
{
"name": "sln1p_phosphorylated",
"label": "Sln1p Phosphorylated",
"maps_to": "signaling_sbml_mosbacher2022_yeast_hog_pathway_model2206230001_model.sln1p_phosphorylated",
"description": "Sln1p Phosphorylated. Maps to SBML symbol `Sln1P_phosphorylated` and is emitted in native SBML units."
},
{
"name": "ssk1_phosphorylated",
"label": "Ssk1 Phosphorylated",
"maps_to": "signaling_sbml_mosbacher2022_yeast_hog_pathway_model2206230001_model.ssk1_phosphorylated",
"description": "Ssk1 Phosphorylated. Maps to SBML symbol `Ssk1_phosphorylated` and is emitted in native SBML units."
},
{
"name": "state",
"label": "Observable state",
"maps_to": "signaling_sbml_mosbacher2022_yeast_hog_pathway_model2206230001_model.state"
},
{
"name": "summary",
"label": "Simulation summary",
"maps_to": "signaling_sbml_mosbacher2022_yeast_hog_pathway_model2206230001_model.summary"
},
{
"name": "species_labels",
"label": "Observable labels",
"maps_to": "signaling_sbml_mosbacher2022_yeast_hog_pathway_model2206230001_model.species_labels"
}
]
},
"tags": [
"signaling",
"systems",
"systems-biology",
"sbml",
"faithful",
"biomodels_ebi",
"cellular-signaling"
],
"title": "Mosbacher2022 - Yeast HOG pathway Lab",
"models": [
{
"path": "models/core",
"alias": "signaling_sbml_mosbacher2022_yeast_hog_pathway_model2206230001_model"
},
{
"path": "models/visualisation",
"alias": "visualisation"
}
],
"wiring": [
{
"to": [
"visualisation.signaling_sbml_mosbacher2022_yeast_hog_pathway_model2206230001_model_state"
],
"from": "signaling_sbml_mosbacher2022_yeast_hog_pathway_model2206230001_model.state"
},
{
"to": [
"visualisation.signaling_sbml_mosbacher2022_yeast_hog_pathway_model2206230001_model_summary"
],
"from": "signaling_sbml_mosbacher2022_yeast_hog_pathway_model2206230001_model.summary"
},
{
"to": [
"visualisation.signaling_sbml_mosbacher2022_yeast_hog_pathway_model2206230001_model_species_labels"
],
"from": "signaling_sbml_mosbacher2022_yeast_hog_pathway_model2206230001_model.species_labels"
}
],
"package": "mosbacher2022-yeast-hog-pathway",
"runtime": {
"duration": 1,
"initial_inputs": {},
"communication_step": 0.1
},
"version": "1.0.0",
"description": "Clean Biosimulant lab for systems signaling model: Mosbacher2022 - Yeast HOG pathway. Values are native SBML quantities; equations, parameters, and initial values remain in the bundled source file.",
"schema_version": "2.0"
}Runtime
Duration1
Comms Step0.1
Runs
Total0
Completed0
Failed0
Metadata
Packagemosbacher2022-yeast-hog-pathway
Created2026-05-16
Updated2026-06-13
signalingsystemssystems-biologysbmlfaithfulbiomodels_ebicellular-signalingvisualisationother