Goldbeter2007 - Sharp Developmental Thresholds Defined Through Bistability Lab

{
  "io": {
    "inputs": [
      {
        "name": "initial_c_concentration_c",
        "label": "Initial C Concentration C",
        "maps_to": "physiology_cellml_goldbeter_gonze_and_pourquie_2007_goldbetergonzepourquie2007_model.initial_c_concentration_c",
        "description": "Initial value for C Concentration C. Maps to source symbol `C`. Units: nanomolar. Naming evidence: source symbol, component, or units provide a direct public name.",
        "accepted_units": [
          "nanomolar"
        ]
      },
      {
        "name": "initial_concentration_f",
        "label": "Initial Concentration F (source F)",
        "maps_to": "physiology_cellml_goldbeter_gonze_and_pourquie_2007_goldbetergonzepourquie2007_model.initial_concentration_f",
        "description": "Initial value for Concentration F (source F). Maps to source symbol `F`. Units: nanomolar. Naming evidence: amount concentration units identify a concentration state.",
        "accepted_units": [
          "nanomolar"
        ]
      }
    ],
    "outputs": [
      {
        "name": "state",
        "label": "Selected Source State",
        "maps_to": "physiology_cellml_goldbeter_gonze_and_pourquie_2007_goldbetergonzepourquie2007_model.state"
      },
      {
        "name": "summary",
        "label": "Simulation Summary",
        "maps_to": "physiology_cellml_goldbeter_gonze_and_pourquie_2007_goldbetergonzepourquie2007_model.summary"
      },
      {
        "name": "trajectory",
        "label": "Source Trajectory",
        "maps_to": "physiology_cellml_goldbeter_gonze_and_pourquie_2007_goldbetergonzepourquie2007_model.trajectory"
      },
      {
        "name": "variable_labels",
        "label": "Observable Labels",
        "maps_to": "physiology_cellml_goldbeter_gonze_and_pourquie_2007_goldbetergonzepourquie2007_model.variable_labels"
      },
      {
        "name": "concentration_f",
        "label": "Concentration F (source F)",
        "maps_to": "physiology_cellml_goldbeter_gonze_and_pourquie_2007_goldbetergonzepourquie2007_model.concentration_f",
        "description": "Concentration F (source F). Maps to source symbol `F`. Units: nanomolar. Naming evidence: amount concentration units identify a concentration state."
      },
      {
        "name": "concentration_m_c",
        "label": "Concentration M C (source M_C)",
        "maps_to": "physiology_cellml_goldbeter_gonze_and_pourquie_2007_goldbetergonzepourquie2007_model.concentration_m_c",
        "description": "Concentration M C (source M_C). Maps to source symbol `M_C`. Units: nanomolar. Naming evidence: amount concentration units identify a concentration state."
      },
      {
        "name": "concentration_ra",
        "label": "Concentration Ra (source RA)",
        "maps_to": "physiology_cellml_goldbeter_gonze_and_pourquie_2007_goldbetergonzepourquie2007_model.concentration_ra",
        "description": "Concentration Ra (source RA). Maps to source symbol `RA`. Units: nanomolar. Naming evidence: amount concentration units identify a concentration state."
      },
      {
        "name": "c_concentration",
        "label": "C Concentration",
        "maps_to": "physiology_cellml_goldbeter_gonze_and_pourquie_2007_goldbetergonzepourquie2007_model.c_concentration",
        "description": "C Concentration. Maps to source symbol `C`. Units: nanomolar. Naming evidence: source symbol, component, or units provide a direct public name."
      },
      {
        "name": "alpha_1",
        "label": "Alpha 1",
        "maps_to": "physiology_cellml_goldbeter_gonze_and_pourquie_2007_goldbetergonzepourquie2007_model.alpha_1",
        "description": "Alpha 1. Maps to source symbol `alpha_1`. Units: dimensionless. Naming evidence: source symbol, component, or units provide a direct public name."
      },
      {
        "name": "alpha_2",
        "label": "Alpha 2",
        "maps_to": "physiology_cellml_goldbeter_gonze_and_pourquie_2007_goldbetergonzepourquie2007_model.alpha_2",
        "description": "Alpha 2. Maps to source symbol `alpha_2`. Units: dimensionless. Naming evidence: source symbol, component, or units provide a direct public name."
      }
    ]
  },
  "title": "Goldbeter2007 - Sharp Developmental Thresholds Defined Through Bistability Lab",
  "models": [
    {
      "path": "models/core",
      "alias": "physiology_cellml_goldbeter_gonze_and_pourquie_2007_goldbetergonzepourquie2007_model",
      "parameters": {
        "model_path": "data/goldbeter_2007.cellml",
        "integration_step": 0.01
      }
    },
    {
      "path": "models/visualisation",
      "alias": "visualisation"
    }
  ],
  "wiring": [
    {
      "to": [
        "visualisation.physiology_cellml_goldbeter_gonze_and_pourquie_2007_goldbetergonzepourquie2007_model_state"
      ],
      "from": "physiology_cellml_goldbeter_gonze_and_pourquie_2007_goldbetergonzepourquie2007_model.state"
    },
    {
      "to": [
        "visualisation.physiology_cellml_goldbeter_gonze_and_pourquie_2007_goldbetergonzepourquie2007_model_summary"
      ],
      "from": "physiology_cellml_goldbeter_gonze_and_pourquie_2007_goldbetergonzepourquie2007_model.summary"
    },
    {
      "to": [
        "visualisation.physiology_cellml_goldbeter_gonze_and_pourquie_2007_goldbetergonzepourquie2007_model_trajectory"
      ],
      "from": "physiology_cellml_goldbeter_gonze_and_pourquie_2007_goldbetergonzepourquie2007_model.trajectory"
    },
    {
      "to": [
        "visualisation.physiology_cellml_goldbeter_gonze_and_pourquie_2007_goldbetergonzepourquie2007_model_variable_labels"
      ],
      "from": "physiology_cellml_goldbeter_gonze_and_pourquie_2007_goldbetergonzepourquie2007_model.variable_labels"
    }
  ],
  "package": "goldbeter2007-sharp-developmental-thresholds-defined-th-be514a74",
  "runtime": {
    "duration": 0.01,
    "settle_steps": 1,
    "initial_inputs": {},
    "communication_step": 0.01
  },
  "version": "1.0.0",
  "description": "Source-faithful physiology lab for Goldbeter, Gonze and Pourquie 2007. Public controls and outputs are mapped to real source symbols for source-model physiology.",
  "schema_version": "2.0"
}