Laub1998 Dictyostelium Cyclic AMP Oscillations Lab

{
  "io": {
    "inputs": [],
    "outputs": [
      {
        "name": "extracellular_cyclic_amp",
        "label": "Extracellular cyclic AMP",
        "maps_to": "laub1998_cyclic_amp_oscillations.extracellular_cyclic_amp",
        "description": "Extracellular cyclic AMP. Maps to SBML symbol `species_0`."
      },
      {
        "name": "intracellular_cyclic_amp",
        "label": "Intracellular cyclic AMP",
        "maps_to": "laub1998_cyclic_amp_oscillations.intracellular_cyclic_amp",
        "description": "Intracellular cyclic AMP. Maps to SBML symbol `species_1`."
      },
      {
        "name": "protein_kinase_a_activity",
        "label": "Protein kinase A activity",
        "maps_to": "laub1998_cyclic_amp_oscillations.protein_kinase_a_activity",
        "description": "Protein kinase A activity. Maps to SBML symbol `species_2`."
      },
      {
        "name": "cyclic_amp_phosphodiesterase_regulator_a",
        "label": "cAMP phosphodiesterase REGA",
        "maps_to": "laub1998_cyclic_amp_oscillations.cyclic_amp_phosphodiesterase_regulator_a",
        "description": "cAMP phosphodiesterase REGA. Maps to SBML symbol `species_3`."
      },
      {
        "name": "adenylate_cyclase_a",
        "label": "Adenylate cyclase A",
        "maps_to": "laub1998_cyclic_amp_oscillations.adenylate_cyclase_a",
        "description": "Adenylate cyclase A. Maps to SBML symbol `species_4`."
      },
      {
        "name": "cyclic_amp_receptor_one",
        "label": "Cyclic AMP receptor 1",
        "maps_to": "laub1998_cyclic_amp_oscillations.cyclic_amp_receptor_one",
        "description": "Cyclic AMP receptor 1. Maps to SBML symbol `species_5`."
      },
      {
        "name": "extracellular_signal_regulated_kinase_two",
        "label": "ERK2",
        "maps_to": "laub1998_cyclic_amp_oscillations.extracellular_signal_regulated_kinase_two",
        "description": "ERK2. Maps to SBML symbol `species_6`."
      },
      {
        "name": "state",
        "maps_to": "laub1998_cyclic_amp_oscillations.state",
        "description": "Full friendly observable record."
      },
      {
        "name": "summary",
        "maps_to": "laub1998_cyclic_amp_oscillations.summary",
        "description": "Core model run summary."
      },
      {
        "name": "species_labels",
        "maps_to": "laub1998_cyclic_amp_oscillations.species_labels",
        "description": "Friendly observable display labels."
      }
    ]
  },
  "title": "Laub1998 Dictyostelium Cyclic AMP Oscillations Lab",
  "models": [
    {
      "path": "models/core",
      "alias": "laub1998_cyclic_amp_oscillations",
      "parameters": {
        "model_path": "data/BIOMD0000000099.xml",
        "integration_step": 0.1
      }
    },
    {
      "path": "models/visualisation",
      "alias": "visualisation"
    }
  ],
  "wiring": [
    {
      "to": [
        "visualisation.core_state"
      ],
      "from": "laub1998_cyclic_amp_oscillations.state"
    },
    {
      "to": [
        "visualisation.core_summary"
      ],
      "from": "laub1998_cyclic_amp_oscillations.summary"
    },
    {
      "to": [
        "visualisation.core_species_labels"
      ],
      "from": "laub1998_cyclic_amp_oscillations.species_labels"
    }
  ],
  "package": "laub1998-dictyostelium-camp-oscillations",
  "runtime": {
    "duration": 10,
    "initial_inputs": {},
    "communication_step": 1
  },
  "version": "1.0.0",
  "description": "Dictyostelium cyclic AMP signaling oscillator executed directly from the bundled SBML source.",
  "schema_version": "2.0"
}