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Source-faithful physiology lab for Na+/HCO3- Cotransporter. Public controls and outputs are mapped to real source symbols for transport physiology.
Manifest
{
"io": {
"inputs": [
{
"name": "initial_na_int",
"label": "Initial Na Int",
"maps_to": "physiology_cellml_na_hco3_cotransporter_295_model.initial_na_int",
"description": "Initial value for Na Int. Maps to source symbol `Na_int`. Units: mM. Naming evidence: source symbol, component, or units provide a direct public name.",
"accepted_units": [
"mM"
]
}
],
"outputs": [
{
"name": "state",
"label": "Selected Source State",
"maps_to": "physiology_cellml_na_hco3_cotransporter_295_model.state"
},
{
"name": "summary",
"label": "Simulation Summary",
"maps_to": "physiology_cellml_na_hco3_cotransporter_295_model.summary"
},
{
"name": "trajectory",
"label": "Source Trajectory",
"maps_to": "physiology_cellml_na_hco3_cotransporter_295_model.trajectory"
},
{
"name": "variable_labels",
"label": "Observable Labels",
"maps_to": "physiology_cellml_na_hco3_cotransporter_295_model.variable_labels"
},
{
"name": "na_int",
"label": "Na Int",
"maps_to": "physiology_cellml_na_hco3_cotransporter_295_model.na_int",
"description": "Na Int. Maps to source symbol `Na_int`. Units: mM. Naming evidence: source symbol, component, or units provide a direct public name."
},
{
"name": "eps",
"label": "Eps",
"maps_to": "physiology_cellml_na_hco3_cotransporter_295_model.eps",
"description": "Eps. Maps to source symbol `eps`. Units: mM. Naming evidence: source symbol, component, or units provide a direct public name."
},
{
"name": "hco3_ext",
"label": "Hco3 Ext",
"maps_to": "physiology_cellml_na_hco3_cotransporter_295_model.hco3_ext",
"description": "Hco3 Ext. Maps to source symbol `HCO3_ext`. Units: mM. Naming evidence: source symbol, component, or units provide a direct public name."
},
{
"name": "hco3_int",
"label": "Hco3 Int",
"maps_to": "physiology_cellml_na_hco3_cotransporter_295_model.hco3_int",
"description": "Hco3 Int. Maps to source symbol `HCO3_int`. Units: mM. Naming evidence: source symbol, component, or units provide a direct public name."
},
{
"name": "j_nbc_hco3",
"label": "J Nbc Hco3",
"maps_to": "physiology_cellml_na_hco3_cotransporter_295_model.j_nbc_hco3",
"description": "J Nbc Hco3. Maps to source symbol `J_NBC_HCO3`. Units: umol_per_s_per_cm2_1. Naming evidence: source symbol, component, or units provide a direct public name."
},
{
"name": "j_nbc_na",
"label": "J Nbc Na",
"maps_to": "physiology_cellml_na_hco3_cotransporter_295_model.j_nbc_na",
"description": "J Nbc Na. Maps to source symbol `J_NBC_Na`. Units: umol_per_s_per_cm2_1. Naming evidence: source symbol, component, or units provide a direct public name."
}
]
},
"title": "Physiome 295 - Na Hco3 Cotransporter Lab",
"models": [
{
"path": "models/core",
"alias": "physiology_cellml_na_hco3_cotransporter_295_model",
"parameters": {
"model_path": "data/NBC_test.cellml",
"integration_step": 0.01
}
},
{
"path": "models/visualisation",
"alias": "visualisation"
}
],
"wiring": [
{
"to": [
"visualisation.physiology_cellml_na_hco3_cotransporter_295_model_state"
],
"from": "physiology_cellml_na_hco3_cotransporter_295_model.state"
},
{
"to": [
"visualisation.physiology_cellml_na_hco3_cotransporter_295_model_summary"
],
"from": "physiology_cellml_na_hco3_cotransporter_295_model.summary"
},
{
"to": [
"visualisation.physiology_cellml_na_hco3_cotransporter_295_model_trajectory"
],
"from": "physiology_cellml_na_hco3_cotransporter_295_model.trajectory"
},
{
"to": [
"visualisation.physiology_cellml_na_hco3_cotransporter_295_model_variable_labels"
],
"from": "physiology_cellml_na_hco3_cotransporter_295_model.variable_labels"
}
],
"package": "physiome295-na-hco3-cotransporter",
"runtime": {
"duration": 0.01,
"settle_steps": 1,
"initial_inputs": {},
"communication_step": 0.01
},
"version": "1.0.0",
"description": "Source-faithful physiology lab for Na+/HCO3- Cotransporter. Public controls and outputs are mapped to real source symbols for transport physiology.",
"schema_version": "2.0"
}Runtime
Duration0.01
Comms Step0.01
Settle Steps1
Runs
Total0
Completed0
Failed0
Metadata
Packagephysiome295-na-hco3-cotransporter
Created2026-05-23
Updated2026-06-13
physiologycellmlphysiomefaithfulvisualisationother