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Invergo2014 - Phototransduction cascade inmouse rod cells This model is described in the article: A comprehensive model of the phototransduction cascade in mouse rod cells. It can be used to explore systemsbiology invergo2014 phototransduction cascade in mouse dynamics and compare simulation behavior across conditions.
Manifest
{
"io": {
"inputs": [
{
"name": "otherstimulus",
"label": "Otherstimulus",
"maps_to": "systemsbiology_sbml_invergo2014_phototransduction_cascade_in_mouse_r_biomd0000000578_model.otherstimulus",
"description": "Source parameter exposed because its SBML label indicates a boundary, stimulus, dose, ligand, protocol, substrate, or environmental control. Maps to SBML symbol `otherstimulus`."
}
],
"outputs": [
{
"name": "state",
"maps_to": "systemsbiology_sbml_invergo2014_phototransduction_cascade_in_mouse_r_biomd0000000578_model.state"
},
{
"name": "summary",
"maps_to": "systemsbiology_sbml_invergo2014_phototransduction_cascade_in_mouse_r_biomd0000000578_model.summary"
},
{
"name": "species_labels",
"maps_to": "systemsbiology_sbml_invergo2014_phototransduction_cascade_in_mouse_r_biomd0000000578_model.species_labels"
},
{
"name": "r_gt",
"maps_to": "systemsbiology_sbml_invergo2014_phototransduction_cascade_in_mouse_r_biomd0000000578_model.r_gt"
},
{
"name": "arr_di",
"maps_to": "systemsbiology_sbml_invergo2014_phototransduction_cascade_in_mouse_r_biomd0000000578_model.arr_di"
},
{
"name": "arr_tetra",
"maps_to": "systemsbiology_sbml_invergo2014_phototransduction_cascade_in_mouse_r_biomd0000000578_model.arr_tetra"
},
{
"name": "rec_r_ca",
"maps_to": "systemsbiology_sbml_invergo2014_phototransduction_cascade_in_mouse_r_biomd0000000578_model.rec_r_ca"
},
{
"name": "rec_r_ca_rk",
"maps_to": "systemsbiology_sbml_invergo2014_phototransduction_cascade_in_mouse_r_biomd0000000578_model.rec_r_ca_rk"
},
{
"name": "ca2_buff",
"maps_to": "systemsbiology_sbml_invergo2014_phototransduction_cascade_in_mouse_r_biomd0000000578_model.ca2_buff"
}
]
},
"tags": [
"systemsbiology",
"sbml",
"biomodels_ebi",
"faithful",
"curated"
],
"title": "Invergo2014 Phototransduction Cascade In Mouse Rod Cells Lab",
"models": [
{
"path": "models/core",
"alias": "systemsbiology_sbml_invergo2014_phototransduction_cascade_in_mouse_r_biomd0000000578_model"
},
{
"path": "models/visualisation",
"alias": "visualisation"
}
],
"wiring": [
{
"to": [
"visualisation.systemsbiology_sbml_invergo2014_phototransduction_cascade_in_mouse_r_biomd0000000578_model_state"
],
"from": "systemsbiology_sbml_invergo2014_phototransduction_cascade_in_mouse_r_biomd0000000578_model.state"
},
{
"to": [
"visualisation.systemsbiology_sbml_invergo2014_phototransduction_cascade_in_mouse_r_biomd0000000578_model_summary"
],
"from": "systemsbiology_sbml_invergo2014_phototransduction_cascade_in_mouse_r_biomd0000000578_model.summary"
},
{
"to": [
"visualisation.systemsbiology_sbml_invergo2014_phototransduction_cascade_in_mouse_r_biomd0000000578_model_species_labels"
],
"from": "systemsbiology_sbml_invergo2014_phototransduction_cascade_in_mouse_r_biomd0000000578_model.species_labels"
}
],
"package": "invergo2014-phototransduction-cascade-in-mouse-rod-cells",
"runtime": {
"duration": 1,
"initial_inputs": {},
"communication_step": 0.1
},
"version": "1.0.0",
"description": "Invergo2014 - Phototransduction cascade inmouse rod cells This model is described in the article: A comprehensive model of the phototransduction cascade in mouse rod cells. It can be used to explore systemsbiology invergo2014 phototransduction cascade in mouse dynamics and compare simulation behavior across conditions.",
"schema_version": "2.0"
}Runtime
Duration1
Comms Step0.1
Runs
Total0
Completed0
Failed0
Metadata
Packageinvergo2014-phototransduction-cascade-in-mouse-rod-cells
Created2026-05-17
Updated2026-06-13
systemsbiologysbmlbiomodels_ebifaithfulcuratedvisualisationother