Bagci2006 - Apoptosis Bistability Lab

{
  "io": {
    "inputs": [
      {
        "name": "initial_apaf_1",
        "label": "Initial Apaf 1",
        "maps_to": "physiology_cellml_bagci_2006_bagci2006_model.initial_apaf_1",
        "description": "Initial value for Apaf 1. Maps to source symbol `Apaf_1`. Units: micromolar. Naming evidence: source symbol, component, or units provide a direct public name.",
        "accepted_units": [
          "micromolar"
        ]
      },
      {
        "name": "initial_apop",
        "label": "Initial Apop",
        "maps_to": "physiology_cellml_bagci_2006_bagci2006_model.initial_apop",
        "description": "Initial value for Apop. Maps to source symbol `Apop`. Units: micromolar. Naming evidence: source symbol, component, or units provide a direct public name.",
        "accepted_units": [
          "micromolar"
        ]
      }
    ],
    "outputs": [
      {
        "name": "state",
        "label": "Selected Source State",
        "maps_to": "physiology_cellml_bagci_2006_bagci2006_model.state"
      },
      {
        "name": "summary",
        "label": "Simulation Summary",
        "maps_to": "physiology_cellml_bagci_2006_bagci2006_model.summary"
      },
      {
        "name": "trajectory",
        "label": "Source Trajectory",
        "maps_to": "physiology_cellml_bagci_2006_bagci2006_model.trajectory"
      },
      {
        "name": "variable_labels",
        "label": "Observable Labels",
        "maps_to": "physiology_cellml_bagci_2006_bagci2006_model.variable_labels"
      },
      {
        "name": "apaf_1",
        "label": "Apaf 1",
        "maps_to": "physiology_cellml_bagci_2006_bagci2006_model.apaf_1",
        "description": "Apaf 1. Maps to source symbol `Apaf_1`. Units: micromolar. Naming evidence: source symbol, component, or units provide a direct public name."
      },
      {
        "name": "apop",
        "label": "Apop",
        "maps_to": "physiology_cellml_bagci_2006_bagci2006_model.apop",
        "description": "Apop. Maps to source symbol `Apop`. Units: micromolar. Naming evidence: source symbol, component, or units provide a direct public name."
      },
      {
        "name": "apop_casp9",
        "label": "Apop Casp9",
        "maps_to": "physiology_cellml_bagci_2006_bagci2006_model.apop_casp9",
        "description": "Apop Casp9. Maps to source symbol `ApopCasp9`. Units: micromolar. Naming evidence: source symbol, component, or units provide a direct public name."
      },
      {
        "name": "apop_casp9_2",
        "label": "Apop Casp9 2",
        "maps_to": "physiology_cellml_bagci_2006_bagci2006_model.apop_casp9_2",
        "description": "Apop Casp9 2. Maps to source symbol `ApopCasp9_2`. Units: micromolar. Naming evidence: source symbol, component, or units provide a direct public name."
      },
      {
        "name": "apop_casp9_2_iap",
        "label": "Apop Casp9 2 Iap",
        "maps_to": "physiology_cellml_bagci_2006_bagci2006_model.apop_casp9_2_iap",
        "description": "Apop Casp9 2 Iap. Maps to source symbol `ApopCasp9_2IAP`. Units: micromolar. Naming evidence: source symbol, component, or units provide a direct public name."
      },
      {
        "name": "apop_casp9_2_pro3",
        "label": "Apop Casp9 2 Pro3",
        "maps_to": "physiology_cellml_bagci_2006_bagci2006_model.apop_casp9_2_pro3",
        "description": "Apop Casp9 2 Pro3. Maps to source symbol `ApopCasp9_2Pro3`. Units: micromolar. Naming evidence: source symbol, component, or units provide a direct public name."
      }
    ]
  },
  "title": "Bagci2006 - Apoptosis Bistability Lab",
  "models": [
    {
      "path": "models/core",
      "alias": "physiology_cellml_bagci_2006_bagci2006_model",
      "parameters": {
        "model_path": "data/bagci_2006.cellml",
        "integration_step": 0.01
      }
    },
    {
      "path": "models/visualisation",
      "alias": "visualisation"
    }
  ],
  "wiring": [
    {
      "to": [
        "visualisation.physiology_cellml_bagci_2006_bagci2006_model_state"
      ],
      "from": "physiology_cellml_bagci_2006_bagci2006_model.state"
    },
    {
      "to": [
        "visualisation.physiology_cellml_bagci_2006_bagci2006_model_summary"
      ],
      "from": "physiology_cellml_bagci_2006_bagci2006_model.summary"
    },
    {
      "to": [
        "visualisation.physiology_cellml_bagci_2006_bagci2006_model_trajectory"
      ],
      "from": "physiology_cellml_bagci_2006_bagci2006_model.trajectory"
    },
    {
      "to": [
        "visualisation.physiology_cellml_bagci_2006_bagci2006_model_variable_labels"
      ],
      "from": "physiology_cellml_bagci_2006_bagci2006_model.variable_labels"
    }
  ],
  "package": "bagci2006-apoptosis-bistability",
  "runtime": {
    "duration": 0.01,
    "settle_steps": 1,
    "initial_inputs": {},
    "communication_step": 0.01
  },
  "version": "1.0.0",
  "description": "Source-faithful physiology lab for Bagci 2006. Public controls and outputs are mapped to real source symbols for source-model physiology.",
  "schema_version": "2.0"
}