Lang2024 - Cell cycle model explains compartment-resolved dynamics of 16 observables in RPE1 cells Lab
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Single-model lab wrapper for Lang2024 - Cell cycle model explains compartment-resolved dynamics of 16 observables in RPE1 cells. This model provides a molecularly detailed description of the biochemical reaction networks governing the mammalian cell cycle, including the restriction point, the G1S, G2/M and metaphase/anaphase tr. It can be used to explore cell-cycle regulation dynamics and compare checkpoint behavior across conditions.
Manifest
{
"io": {
"inputs": [],
"outputs": [
{
"name": "cyt_cyclin_d",
"label": "Cyt Cyclin D",
"maps_to": "cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.cyt_cyclin_d",
"description": "Tracks Cyt Cyclin D in the lab model via `cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.cyt_cyclin_d`."
},
{
"name": "cyt_cyclin_e_cdkn1a_b",
"label": "Cyt Cyclin E CDKN1A B",
"maps_to": "cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.cyt_cyclin_e_cdkn1a_b",
"description": "Tracks Cyt Cyclin E CDKN1A B in the lab model via `cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.cyt_cyclin_e_cdkn1a_b`."
},
{
"name": "cyt_e2f_dbd_rb1_ser332u",
"label": "Cyt E2F DBD Rb1 Ser332u",
"maps_to": "cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.cyt_e2f_dbd_rb1_ser332u",
"description": "Tracks Cyt E2F DBD Rb1 Ser332u in the lab model via `cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.cyt_e2f_dbd_rb1_ser332u`."
},
{
"name": "cyt_e2f_dbd_rb1_ser332p",
"label": "Cyt E2F DBD Rb1 Ser332p",
"maps_to": "cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.cyt_e2f_dbd_rb1_ser332p",
"description": "Tracks Cyt E2F DBD Rb1 Ser332p in the lab model via `cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.cyt_e2f_dbd_rb1_ser332p`."
},
{
"name": "cyt_cyclin_active_cdkn1a_b",
"label": "Cyt Cyclin Active CDKN1A B",
"maps_to": "cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.cyt_cyclin_active_cdkn1a_b",
"description": "Tracks Cyt Cyclin Active CDKN1A B in the lab model via `cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.cyt_cyclin_active_cdkn1a_b`."
},
{
"name": "cyt_cyclin_b_cdk1_thr14_tyr15u_cdkn1a",
"label": "Cyt Cyclin B CDK1 Thr14 Tyr15u CDKN1A",
"maps_to": "cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.cyt_cyclin_b_cdk1_thr14_tyr15u_cdkn1a",
"description": "Tracks Cyt Cyclin B CDK1 Thr14 Tyr15u CDKN1A in the lab model via `cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.cyt_cyclin_b_cdk1_thr14_tyr15u_cdkn1a`."
},
{
"name": "cyt_e2f_dbd_rb1_1_ser332u_rb1_e2f_1_ser807_ser811u",
"label": "Cyt E2F DBD Rb1 1 Ser332u Rb1 E2F 1 Ser807 Ser811u",
"maps_to": "cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.cyt_e2f_dbd_rb1_1_ser332u_rb1_e2f_1_ser807_ser811u",
"description": "Tracks Cyt E2F DBD Rb1 1 Ser332u Rb1 E2F 1 Ser807 Ser811u in the lab model via `cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.cyt_e2f_dbd_rb1_1_ser332u_rb1_e2f_1_ser807_ser811u`."
},
{
"name": "cyt_e2f_dbd_rb1_1_ser332p_rb1_e2f_1_ser807_ser811u",
"label": "Cyt E2F DBD Rb1 1 Ser332p Rb1 E2F 1 Ser807 Ser811u",
"maps_to": "cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.cyt_e2f_dbd_rb1_1_ser332p_rb1_e2f_1_ser807_ser811u",
"description": "Tracks Cyt E2F DBD Rb1 1 Ser332p Rb1 E2F 1 Ser807 Ser811u in the lab model via `cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.cyt_e2f_dbd_rb1_1_ser332p_rb1_e2f_1_ser807_ser811u`."
},
{
"name": "cyt_rb1_e2f_ser807_ser811u",
"label": "Cyt Rb1 E2F Ser807 Ser811u",
"maps_to": "cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.cyt_rb1_e2f_ser807_ser811u",
"description": "Tracks Cyt Rb1 E2F Ser807 Ser811u in the lab model via `cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.cyt_rb1_e2f_ser807_ser811u`."
},
{
"name": "cyt_rb1_e2f_ser807_ser811p",
"label": "Cyt Rb1 E2F Ser807 Ser811p",
"maps_to": "cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.cyt_rb1_e2f_ser807_ser811p",
"description": "Tracks Cyt Rb1 E2F Ser807 Ser811p in the lab model via `cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.cyt_rb1_e2f_ser807_ser811p`."
},
{
"name": "cyt_ppp2r2b_ensa_arpp19",
"label": "Cyt PPP2R2B ENSA ARPP19",
"maps_to": "cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.cyt_ppp2r2b_ensa_arpp19",
"description": "Tracks Cyt PPP2R2B ENSA ARPP19 in the lab model via `cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.cyt_ppp2r2b_ensa_arpp19`."
},
{
"name": "cyt_apc_c_c_fbxo5_fzr1_cdc20_ser355u",
"label": "Cyt APC/C/C FBXO5 FZR1 Cdc20 Ser355u",
"maps_to": "cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.cyt_apc_c_c_fbxo5_fzr1_cdc20_ser355u",
"description": "Tracks Cyt APC/C/C FBXO5 FZR1 Cdc20 Ser355u in the lab model via `cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.cyt_apc_c_c_fbxo5_fzr1_cdc20_ser355u`."
},
{
"name": "cyt_cdc20_apc_c_c",
"label": "Cyt Cdc20 APC/C/C",
"maps_to": "cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.cyt_cdc20_apc_c_c",
"description": "Tracks Cyt Cdc20 APC/C/C in the lab model via `cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.cyt_cdc20_apc_c_c`."
},
{
"name": "cyt_apc_c_c_fbxo5_fzr1_cdc20_1_ser355p_cdc20_apc_c_c_1",
"label": "Cyt APC/C/C FBXO5 FZR1 Cdc20 1 Ser355p Cdc20 APC/C/C 1",
"maps_to": "cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.cyt_apc_c_c_fbxo5_fzr1_cdc20_1_ser355p_cdc20_apc_c_c_1",
"description": "Tracks Cyt APC/C/C FBXO5 FZR1 Cdc20 1 Ser355p Cdc20 APC/C/C 1 in the lab model via `cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.cyt_apc_c_c_fbxo5_fzr1_cdc20_1_ser355p_cdc20_apc_c_c_1`."
},
{
"name": "cyt_apc_c_c_fbxo5_fzr1_cdc20_ser355p",
"label": "Cyt APC/C/C FBXO5 FZR1 Cdc20 Ser355p",
"maps_to": "cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.cyt_apc_c_c_fbxo5_fzr1_cdc20_ser355p",
"description": "Tracks Cyt APC/C/C FBXO5 FZR1 Cdc20 Ser355p in the lab model via `cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.cyt_apc_c_c_fbxo5_fzr1_cdc20_ser355p`."
},
{
"name": "cyt_apc_c_c_fbxo5_fzr1_cdc20_1_ser355u_fzr1_apc_c_c_1_fbxo5_n_termu",
"label": "Cyt APC/C/C FBXO5 FZR1 Cdc20 1 Ser355u FZR1 APC/C/C 1 FBXO5 N Termu",
"maps_to": "cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.cyt_apc_c_c_fbxo5_fzr1_cdc20_1_ser355u_fzr1_apc_c_c_1_fbxo5_n_termu",
"description": "Tracks Cyt APC/C/C FBXO5 FZR1 Cdc20 1 Ser355u FZR1 APC/C/C 1 FBXO5 N Termu in the lab model via `cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.cyt_apc_c_c_fbxo5_fzr1_cdc20_1_ser355u_fzr1_apc_c_c_1_fbxo5_n_termu`."
},
{
"name": "cyt_fzr1_apc_c_c_fbxo5_n_termu",
"label": "Cyt FZR1 APC/C/C FBXO5 N Termu",
"maps_to": "cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.cyt_fzr1_apc_c_c_fbxo5_n_termu",
"description": "Tracks Cyt FZR1 APC/C/C FBXO5 N Termu in the lab model via `cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.cyt_fzr1_apc_c_c_fbxo5_n_termu`."
},
{
"name": "cyt_fzr1_apc_c_c_fbxo5_n_termp",
"label": "Cyt FZR1 APC/C/C FBXO5 N Termp",
"maps_to": "cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.cyt_fzr1_apc_c_c_fbxo5_n_termp",
"description": "Tracks Cyt FZR1 APC/C/C FBXO5 N Termp in the lab model via `cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.cyt_fzr1_apc_c_c_fbxo5_n_termp`."
},
{
"name": "cyt_apc_c_c_fbxo5_1_fzr1_cdc20_2_ser355u_fbxo5_apc_c_c_1_fzr1_3_ser182u_fzr1_apc_c_c_2_fbxo5_3_n_termu",
"label": "Cyt APC/C/C FBXO5 1 FZR1 Cdc20 2 Ser355u FBXO5 APC/C/C 1 FZR1 3 Ser182u FZR1 APC/C/C 2 FBXO5 3 N Termu",
"maps_to": "cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.cyt_apc_c_c_fbxo5_1_fzr1_cdc20_2_ser355u_fbxo5_apc_c_c_1_fzr1_3_ser182u_fzr1_apc_c_c_2_fbxo5_3_n_termu",
"description": "Tracks Cyt APC/C/C FBXO5 1 FZR1 Cdc20 2 Ser355u FBXO5 APC/C/C 1 FZR1 3 Ser182u FZR1 APC/C/C 2 FBXO5 3 N Termu in the lab model via `cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.cyt_apc_c_c_fbxo5_1_fzr1_cdc20_2_ser355u_fbxo5_apc_c_c_1_fzr1_3_ser182u_fzr1_apc_c_c_2_fbxo5_3_n_termu`."
},
{
"name": "cyt_fbxo5_apc_c_c_fzr1_ser182u",
"label": "Cyt FBXO5 APC/C/C FZR1 Ser182u",
"maps_to": "cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.cyt_fbxo5_apc_c_c_fzr1_ser182u",
"description": "Tracks Cyt FBXO5 APC/C/C FZR1 Ser182u in the lab model via `cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.cyt_fbxo5_apc_c_c_fzr1_ser182u`."
},
{
"name": "cyt_apc_c_c_fbxo5_1_fzr1_cdc20_2_ser355p_fbxo5_apc_c_c_1_fzr1_3_ser182u_fzr1_apc_c_c_2_fbxo5_3_n_termu",
"label": "Cyt APC/C/C FBXO5 1 FZR1 Cdc20 2 Ser355p FBXO5 APC/C/C 1 FZR1 3 Ser182u FZR1 APC/C/C 2 FBXO5 3 N Termu",
"maps_to": "cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.cyt_apc_c_c_fbxo5_1_fzr1_cdc20_2_ser355p_fbxo5_apc_c_c_1_fzr1_3_ser182u_fzr1_apc_c_c_2_fbxo5_3_n_termu",
"description": "Tracks Cyt APC/C/C FBXO5 1 FZR1 Cdc20 2 Ser355p FBXO5 APC/C/C 1 FZR1 3 Ser182u FZR1 APC/C/C 2 FBXO5 3 N Termu in the lab model via `cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.cyt_apc_c_c_fbxo5_1_fzr1_cdc20_2_ser355p_fbxo5_apc_c_c_1_fzr1_3_ser182u_fzr1_apc_c_c_2_fbxo5_3_n_termu`."
},
{
"name": "cyt_apc_c_c_fbxo5_fzr1_cdc20_1_ser355p_fzr1_apc_c_c_1_fbxo5_n_termu",
"label": "Cyt APC/C/C FBXO5 FZR1 Cdc20 1 Ser355p FZR1 APC/C/C 1 FBXO5 N Termu",
"maps_to": "cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.cyt_apc_c_c_fbxo5_fzr1_cdc20_1_ser355p_fzr1_apc_c_c_1_fbxo5_n_termu",
"description": "Tracks Cyt APC/C/C FBXO5 FZR1 Cdc20 1 Ser355p FZR1 APC/C/C 1 FBXO5 N Termu in the lab model via `cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.cyt_apc_c_c_fbxo5_fzr1_cdc20_1_ser355p_fzr1_apc_c_c_1_fbxo5_n_termu`."
},
{
"name": "cyt_fbxo5_apc_c_c_fzr1_ser182p",
"label": "Cyt FBXO5 APC/C/C FZR1 Ser182p",
"maps_to": "cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.cyt_fbxo5_apc_c_c_fzr1_ser182p",
"description": "Tracks Cyt FBXO5 APC/C/C FZR1 Ser182p in the lab model via `cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.cyt_fbxo5_apc_c_c_fzr1_ser182p`."
},
{
"name": "cyt_foxm1_dbd_thr600u",
"label": "Cyt FOXM1 DBD Thr600u",
"maps_to": "cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.cyt_foxm1_dbd_thr600u",
"description": "Tracks Cyt FOXM1 DBD Thr600u in the lab model via `cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.cyt_foxm1_dbd_thr600u`."
},
{
"name": "cyt_foxm1_dbd_thr600p",
"label": "Cyt FOXM1 DBD Thr600p",
"maps_to": "cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.cyt_foxm1_dbd_thr600p",
"description": "Tracks Cyt FOXM1 DBD Thr600p in the lab model via `cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.cyt_foxm1_dbd_thr600p`."
},
{
"name": "cyt_wee1_ser123u",
"label": "Cyt Wee1 Ser123u",
"maps_to": "cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.cyt_wee1_ser123u",
"description": "Tracks Cyt Wee1 Ser123u in the lab model via `cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.cyt_wee1_ser123u`."
},
{
"name": "cyt_cyclin_b_cdk1_thr14_tyr15p_cdkn1a",
"label": "Cyt Cyclin B CDK1 Thr14 Tyr15p CDKN1A",
"maps_to": "cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.cyt_cyclin_b_cdk1_thr14_tyr15p_cdkn1a",
"description": "Tracks Cyt Cyclin B CDK1 Thr14 Tyr15p CDKN1A in the lab model via `cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.cyt_cyclin_b_cdk1_thr14_tyr15p_cdkn1a`."
},
{
"name": "cyt_wee1_ser123p",
"label": "Cyt Wee1 Ser123p",
"maps_to": "cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.cyt_wee1_ser123p",
"description": "Tracks Cyt Wee1 Ser123p in the lab model via `cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.cyt_wee1_ser123p`."
},
{
"name": "cyt_cdc25_p_sitesp",
"label": "Cyt Cdc25 P Sitesp",
"maps_to": "cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.cyt_cdc25_p_sitesp",
"description": "Tracks Cyt Cdc25 P Sitesp in the lab model via `cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.cyt_cdc25_p_sitesp`."
},
{
"name": "cyt_cdc25_p_sitesu",
"label": "Cyt Cdc25 P Sitesu",
"maps_to": "cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.cyt_cdc25_p_sitesu",
"description": "Tracks Cyt Cdc25 P Sitesu in the lab model via `cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.cyt_cdc25_p_sitesu`."
},
{
"name": "cyt_mastl_thr198u",
"label": "Cyt MASTL Thr198u",
"maps_to": "cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.cyt_mastl_thr198u",
"description": "Tracks Cyt MASTL Thr198u in the lab model via `cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.cyt_mastl_thr198u`."
},
{
"name": "cyt_mastl_thr198p",
"label": "Cyt MASTL Thr198p",
"maps_to": "cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.cyt_mastl_thr198p",
"description": "Tracks Cyt MASTL Thr198p in the lab model via `cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.cyt_mastl_thr198p`."
},
{
"name": "cyt_ensa_arpp19_ppp2r2b_ser62_ser67u",
"label": "Cyt ENSA ARPP19 PPP2R2B Ser62 Ser67u",
"maps_to": "cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.cyt_ensa_arpp19_ppp2r2b_ser62_ser67u",
"description": "Tracks Cyt ENSA ARPP19 PPP2R2B Ser62 Ser67u in the lab model via `cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.cyt_ensa_arpp19_ppp2r2b_ser62_ser67u`."
},
{
"name": "cyt_ensa_arpp19_ppp2r2b_ser62_ser67p",
"label": "Cyt ENSA ARPP19 PPP2R2B Ser62 Ser67p",
"maps_to": "cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.cyt_ensa_arpp19_ppp2r2b_ser62_ser67p",
"description": "Tracks Cyt ENSA ARPP19 PPP2R2B Ser62 Ser67p in the lab model via `cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.cyt_ensa_arpp19_ppp2r2b_ser62_ser67p`."
},
{
"name": "cyt_ensa_arpp19_ppp2r2b_1_ser62_ser67p_ppp2r2b_ensa_arpp19_1",
"label": "Cyt ENSA ARPP19 PPP2R2B 1 Ser62 Ser67p PPP2R2B ENSA ARPP19 1",
"maps_to": "cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.cyt_ensa_arpp19_ppp2r2b_1_ser62_ser67p_ppp2r2b_ensa_arpp19_1",
"description": "Tracks Cyt ENSA ARPP19 PPP2R2B 1 Ser62 Ser67p PPP2R2B ENSA ARPP19 1 in the lab model via `cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.cyt_ensa_arpp19_ppp2r2b_1_ser62_ser67p_ppp2r2b_ensa_arpp19_1`."
},
{
"name": "cyt_skp2",
"label": "Cyt SKP2",
"maps_to": "cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.cyt_skp2",
"description": "Tracks Cyt SKP2 in the lab model via `cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.cyt_skp2`."
},
{
"name": "cyt_tp53_dbd_ser15p",
"label": "Cyt TP53 DBD Ser15p",
"maps_to": "cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.cyt_tp53_dbd_ser15p",
"description": "Tracks Cyt TP53 DBD Ser15p in the lab model via `cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.cyt_tp53_dbd_ser15p`."
},
{
"name": "cyt_foxo_dbd",
"label": "Cyt FOXO DBD",
"maps_to": "cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.cyt_foxo_dbd",
"description": "Tracks Cyt FOXO DBD in the lab model via `cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.cyt_foxo_dbd`."
},
{
"name": "num_nup_p_sitesu",
"label": "Num NUP P Sitesu",
"maps_to": "cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.num_nup_p_sitesu",
"description": "Tracks Num NUP P Sitesu in the lab model via `cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.num_nup_p_sitesu`."
},
{
"name": "nuc_cyclin_d",
"label": "Nuc Cyclin D",
"maps_to": "cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.nuc_cyclin_d",
"description": "Tracks Nuc Cyclin D in the lab model via `cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.nuc_cyclin_d`."
},
{
"name": "nuc_cyclin_e_cdkn1a_b",
"label": "Nuc Cyclin E CDKN1A B",
"maps_to": "cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.nuc_cyclin_e_cdkn1a_b",
"description": "Tracks Nuc Cyclin E CDKN1A B in the lab model via `cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.nuc_cyclin_e_cdkn1a_b`."
},
{
"name": "nuc_e2f_dbd_rb1_ser332u",
"label": "Nuc E2F DBD Rb1 Ser332u",
"maps_to": "cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.nuc_e2f_dbd_rb1_ser332u",
"description": "Tracks Nuc E2F DBD Rb1 Ser332u in the lab model via `cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.nuc_e2f_dbd_rb1_ser332u`."
},
{
"name": "nuc_e2f_dbd_rb1_ser332p",
"label": "Nuc E2F DBD Rb1 Ser332p",
"maps_to": "cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.nuc_e2f_dbd_rb1_ser332p",
"description": "Tracks Nuc E2F DBD Rb1 Ser332p in the lab model via `cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.nuc_e2f_dbd_rb1_ser332p`."
},
{
"name": "nuc_cyclin_active_cdkn1a_b",
"label": "Nuc Cyclin Active CDKN1A B",
"maps_to": "cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.nuc_cyclin_active_cdkn1a_b",
"description": "Tracks Nuc Cyclin Active CDKN1A B in the lab model via `cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.nuc_cyclin_active_cdkn1a_b`."
},
{
"name": "nuc_cyclin_b_cdk1_thr14_tyr15u_cdkn1a",
"label": "Nuc Cyclin B CDK1 Thr14 Tyr15u CDKN1A",
"maps_to": "cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.nuc_cyclin_b_cdk1_thr14_tyr15u_cdkn1a",
"description": "Tracks Nuc Cyclin B CDK1 Thr14 Tyr15u CDKN1A in the lab model via `cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.nuc_cyclin_b_cdk1_thr14_tyr15u_cdkn1a`."
},
{
"name": "nuc_e2f_dbd_rb1_1_ser332u_rb1_e2f_1_ser807_ser811u",
"label": "Nuc E2F DBD Rb1 1 Ser332u Rb1 E2F 1 Ser807 Ser811u",
"maps_to": "cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.nuc_e2f_dbd_rb1_1_ser332u_rb1_e2f_1_ser807_ser811u",
"description": "Tracks Nuc E2F DBD Rb1 1 Ser332u Rb1 E2F 1 Ser807 Ser811u in the lab model via `cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.nuc_e2f_dbd_rb1_1_ser332u_rb1_e2f_1_ser807_ser811u`."
},
{
"name": "nuc_e2f_dbd_rb1_1_ser332p_rb1_e2f_1_ser807_ser811u",
"label": "Nuc E2F DBD Rb1 1 Ser332p Rb1 E2F 1 Ser807 Ser811u",
"maps_to": "cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.nuc_e2f_dbd_rb1_1_ser332p_rb1_e2f_1_ser807_ser811u",
"description": "Tracks Nuc E2F DBD Rb1 1 Ser332p Rb1 E2F 1 Ser807 Ser811u in the lab model via `cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.nuc_e2f_dbd_rb1_1_ser332p_rb1_e2f_1_ser807_ser811u`."
},
{
"name": "nuc_rb1_e2f_ser807_ser811u",
"label": "Nuc Rb1 E2F Ser807 Ser811u",
"maps_to": "cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.nuc_rb1_e2f_ser807_ser811u",
"description": "Tracks Nuc Rb1 E2F Ser807 Ser811u in the lab model via `cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.nuc_rb1_e2f_ser807_ser811u`."
},
{
"name": "nuc_rb1_e2f_ser807_ser811p",
"label": "Nuc Rb1 E2F Ser807 Ser811p",
"maps_to": "cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.nuc_rb1_e2f_ser807_ser811p",
"description": "Tracks Nuc Rb1 E2F Ser807 Ser811p in the lab model via `cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.nuc_rb1_e2f_ser807_ser811p`."
},
{
"name": "nuc_ppp2r2b_ensa_arpp19",
"label": "Nuc PPP2R2B ENSA ARPP19",
"maps_to": "cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.nuc_ppp2r2b_ensa_arpp19",
"description": "Tracks Nuc PPP2R2B ENSA ARPP19 in the lab model via `cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.nuc_ppp2r2b_ensa_arpp19`."
},
{
"name": "nuc_apc_c_c_fbxo5_fzr1_cdc20_ser355u",
"label": "Nuc APC/C/C FBXO5 FZR1 Cdc20 Ser355u",
"maps_to": "cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.nuc_apc_c_c_fbxo5_fzr1_cdc20_ser355u",
"description": "Tracks Nuc APC/C/C FBXO5 FZR1 Cdc20 Ser355u in the lab model via `cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.nuc_apc_c_c_fbxo5_fzr1_cdc20_ser355u`."
},
{
"name": "nuc_cdc20_apc_c_c",
"label": "Nuc Cdc20 APC/C/C",
"maps_to": "cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.nuc_cdc20_apc_c_c",
"description": "Tracks Nuc Cdc20 APC/C/C in the lab model via `cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.nuc_cdc20_apc_c_c`."
},
{
"name": "nuc_apc_c_c_fbxo5_fzr1_cdc20_1_ser355p_cdc20_apc_c_c_1",
"label": "Nuc APC/C/C FBXO5 FZR1 Cdc20 1 Ser355p Cdc20 APC/C/C 1",
"maps_to": "cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.nuc_apc_c_c_fbxo5_fzr1_cdc20_1_ser355p_cdc20_apc_c_c_1",
"description": "Tracks Nuc APC/C/C FBXO5 FZR1 Cdc20 1 Ser355p Cdc20 APC/C/C 1 in the lab model via `cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.nuc_apc_c_c_fbxo5_fzr1_cdc20_1_ser355p_cdc20_apc_c_c_1`."
},
{
"name": "nuc_apc_c_c_fbxo5_fzr1_cdc20_ser355p",
"label": "Nuc APC/C/C FBXO5 FZR1 Cdc20 Ser355p",
"maps_to": "cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.nuc_apc_c_c_fbxo5_fzr1_cdc20_ser355p",
"description": "Tracks Nuc APC/C/C FBXO5 FZR1 Cdc20 Ser355p in the lab model via `cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.nuc_apc_c_c_fbxo5_fzr1_cdc20_ser355p`."
},
{
"name": "nuc_apc_c_c_fbxo5_fzr1_cdc20_1_ser355u_fzr1_apc_c_c_1_fbxo5_n_termu",
"label": "Nuc APC/C/C FBXO5 FZR1 Cdc20 1 Ser355u FZR1 APC/C/C 1 FBXO5 N Termu",
"maps_to": "cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.nuc_apc_c_c_fbxo5_fzr1_cdc20_1_ser355u_fzr1_apc_c_c_1_fbxo5_n_termu",
"description": "Tracks Nuc APC/C/C FBXO5 FZR1 Cdc20 1 Ser355u FZR1 APC/C/C 1 FBXO5 N Termu in the lab model via `cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.nuc_apc_c_c_fbxo5_fzr1_cdc20_1_ser355u_fzr1_apc_c_c_1_fbxo5_n_termu`."
},
{
"name": "nuc_fzr1_apc_c_c_fbxo5_n_termu",
"label": "Nuc FZR1 APC/C/C FBXO5 N Termu",
"maps_to": "cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.nuc_fzr1_apc_c_c_fbxo5_n_termu",
"description": "Tracks Nuc FZR1 APC/C/C FBXO5 N Termu in the lab model via `cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.nuc_fzr1_apc_c_c_fbxo5_n_termu`."
},
{
"name": "nuc_fzr1_apc_c_c_fbxo5_n_termp",
"label": "Nuc FZR1 APC/C/C FBXO5 N Termp",
"maps_to": "cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.nuc_fzr1_apc_c_c_fbxo5_n_termp",
"description": "Tracks Nuc FZR1 APC/C/C FBXO5 N Termp in the lab model via `cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.nuc_fzr1_apc_c_c_fbxo5_n_termp`."
},
{
"name": "nuc_apc_c_c_fbxo5_1_fzr1_cdc20_2_ser355u_fbxo5_apc_c_c_1_fzr1_3_ser182u_fzr1_apc_c_c_2_fbxo5_3_n_termu",
"label": "Nuc APC/C/C FBXO5 1 FZR1 Cdc20 2 Ser355u FBXO5 APC/C/C 1 FZR1 3 Ser182u FZR1 APC/C/C 2 FBXO5 3 N Termu",
"maps_to": "cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.nuc_apc_c_c_fbxo5_1_fzr1_cdc20_2_ser355u_fbxo5_apc_c_c_1_fzr1_3_ser182u_fzr1_apc_c_c_2_fbxo5_3_n_termu",
"description": "Tracks Nuc APC/C/C FBXO5 1 FZR1 Cdc20 2 Ser355u FBXO5 APC/C/C 1 FZR1 3 Ser182u FZR1 APC/C/C 2 FBXO5 3 N Termu in the lab model via `cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.nuc_apc_c_c_fbxo5_1_fzr1_cdc20_2_ser355u_fbxo5_apc_c_c_1_fzr1_3_ser182u_fzr1_apc_c_c_2_fbxo5_3_n_termu`."
},
{
"name": "nuc_fbxo5_apc_c_c_fzr1_ser182u",
"label": "Nuc FBXO5 APC/C/C FZR1 Ser182u",
"maps_to": "cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.nuc_fbxo5_apc_c_c_fzr1_ser182u",
"description": "Tracks Nuc FBXO5 APC/C/C FZR1 Ser182u in the lab model via `cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.nuc_fbxo5_apc_c_c_fzr1_ser182u`."
},
{
"name": "nuc_apc_c_c_fbxo5_1_fzr1_cdc20_2_ser355p_fbxo5_apc_c_c_1_fzr1_3_ser182u_fzr1_apc_c_c_2_fbxo5_3_n_termu",
"label": "Nuc APC/C/C FBXO5 1 FZR1 Cdc20 2 Ser355p FBXO5 APC/C/C 1 FZR1 3 Ser182u FZR1 APC/C/C 2 FBXO5 3 N Termu",
"maps_to": "cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.nuc_apc_c_c_fbxo5_1_fzr1_cdc20_2_ser355p_fbxo5_apc_c_c_1_fzr1_3_ser182u_fzr1_apc_c_c_2_fbxo5_3_n_termu",
"description": "Tracks Nuc APC/C/C FBXO5 1 FZR1 Cdc20 2 Ser355p FBXO5 APC/C/C 1 FZR1 3 Ser182u FZR1 APC/C/C 2 FBXO5 3 N Termu in the lab model via `cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.nuc_apc_c_c_fbxo5_1_fzr1_cdc20_2_ser355p_fbxo5_apc_c_c_1_fzr1_3_ser182u_fzr1_apc_c_c_2_fbxo5_3_n_termu`."
},
{
"name": "nuc_apc_c_c_fbxo5_fzr1_cdc20_1_ser355p_fzr1_apc_c_c_1_fbxo5_n_termu",
"label": "Nuc APC/C/C FBXO5 FZR1 Cdc20 1 Ser355p FZR1 APC/C/C 1 FBXO5 N Termu",
"maps_to": "cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.nuc_apc_c_c_fbxo5_fzr1_cdc20_1_ser355p_fzr1_apc_c_c_1_fbxo5_n_termu",
"description": "Tracks Nuc APC/C/C FBXO5 FZR1 Cdc20 1 Ser355p FZR1 APC/C/C 1 FBXO5 N Termu in the lab model via `cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.nuc_apc_c_c_fbxo5_fzr1_cdc20_1_ser355p_fzr1_apc_c_c_1_fbxo5_n_termu`."
},
{
"name": "nuc_fbxo5_apc_c_c_fzr1_ser182p",
"label": "Nuc FBXO5 APC/C/C FZR1 Ser182p",
"maps_to": "cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.nuc_fbxo5_apc_c_c_fzr1_ser182p",
"description": "Tracks Nuc FBXO5 APC/C/C FZR1 Ser182p in the lab model via `cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.nuc_fbxo5_apc_c_c_fzr1_ser182p`."
},
{
"name": "nuc_foxm1_dbd_thr600u",
"label": "Nuc FOXM1 DBD Thr600u",
"maps_to": "cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.nuc_foxm1_dbd_thr600u",
"description": "Tracks Nuc FOXM1 DBD Thr600u in the lab model via `cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.nuc_foxm1_dbd_thr600u`."
},
{
"name": "nuc_foxm1_dbd_thr600p",
"label": "Nuc FOXM1 DBD Thr600p",
"maps_to": "cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.nuc_foxm1_dbd_thr600p",
"description": "Tracks Nuc FOXM1 DBD Thr600p in the lab model via `cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.nuc_foxm1_dbd_thr600p`."
},
{
"name": "nuc_cyclin_b_promoter_foxm1_1_foxm1_dbd_1_thr600p",
"label": "Nuc Cyclin B Promoter FOXM1 1 FOXM1 DBD 1 Thr600p",
"maps_to": "cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.nuc_cyclin_b_promoter_foxm1_1_foxm1_dbd_1_thr600p",
"description": "Tracks Nuc Cyclin B Promoter FOXM1 1 FOXM1 DBD 1 Thr600p in the lab model via `cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.nuc_cyclin_b_promoter_foxm1_1_foxm1_dbd_1_thr600p`."
},
{
"name": "nuc_cyclin_b_promoter_foxm1",
"label": "Nuc Cyclin B Promoter FOXM1",
"maps_to": "cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.nuc_cyclin_b_promoter_foxm1",
"description": "Tracks Nuc Cyclin B Promoter FOXM1 in the lab model via `cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.nuc_cyclin_b_promoter_foxm1`."
},
{
"name": "nuc_cdc20_promoter_foxm1",
"label": "Nuc Cdc20 Promoter FOXM1",
"maps_to": "cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.nuc_cdc20_promoter_foxm1",
"description": "Tracks Nuc Cdc20 Promoter FOXM1 in the lab model via `cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.nuc_cdc20_promoter_foxm1`."
},
{
"name": "nuc_cdc20_promoter_foxm1_1_foxm1_dbd_1_thr600p",
"label": "Nuc Cdc20 Promoter FOXM1 1 FOXM1 DBD 1 Thr600p",
"maps_to": "cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.nuc_cdc20_promoter_foxm1_1_foxm1_dbd_1_thr600p",
"description": "Tracks Nuc Cdc20 Promoter FOXM1 1 FOXM1 DBD 1 Thr600p in the lab model via `cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.nuc_cdc20_promoter_foxm1_1_foxm1_dbd_1_thr600p`."
},
{
"name": "nuc_wee1_ser123u",
"label": "Nuc Wee1 Ser123u",
"maps_to": "cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.nuc_wee1_ser123u",
"description": "Tracks Nuc Wee1 Ser123u in the lab model via `cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.nuc_wee1_ser123u`."
},
{
"name": "nuc_cyclin_b_cdk1_thr14_tyr15p_cdkn1a",
"label": "Nuc Cyclin B CDK1 Thr14 Tyr15p CDKN1A",
"maps_to": "cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.nuc_cyclin_b_cdk1_thr14_tyr15p_cdkn1a",
"description": "Tracks Nuc Cyclin B CDK1 Thr14 Tyr15p CDKN1A in the lab model via `cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.nuc_cyclin_b_cdk1_thr14_tyr15p_cdkn1a`."
},
{
"name": "nuc_wee1_ser123p",
"label": "Nuc Wee1 Ser123p",
"maps_to": "cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.nuc_wee1_ser123p",
"description": "Tracks Nuc Wee1 Ser123p in the lab model via `cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.nuc_wee1_ser123p`."
},
{
"name": "nuc_cdc25_p_sitesp",
"label": "Nuc Cdc25 P Sitesp",
"maps_to": "cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.nuc_cdc25_p_sitesp",
"description": "Tracks Nuc Cdc25 P Sitesp in the lab model via `cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.nuc_cdc25_p_sitesp`."
},
{
"name": "nuc_cdc25_p_sitesu",
"label": "Nuc Cdc25 P Sitesu",
"maps_to": "cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.nuc_cdc25_p_sitesu",
"description": "Tracks Nuc Cdc25 P Sitesu in the lab model via `cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.nuc_cdc25_p_sitesu`."
},
{
"name": "nuc_mastl_thr198u",
"label": "Nuc MASTL Thr198u",
"maps_to": "cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.nuc_mastl_thr198u",
"description": "Tracks Nuc MASTL Thr198u in the lab model via `cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.nuc_mastl_thr198u`."
},
{
"name": "nuc_mastl_thr198p",
"label": "Nuc MASTL Thr198p",
"maps_to": "cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.nuc_mastl_thr198p",
"description": "Tracks Nuc MASTL Thr198p in the lab model via `cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.nuc_mastl_thr198p`."
},
{
"name": "nuc_ensa_arpp19_ppp2r2b_ser62_ser67u",
"label": "Nuc ENSA ARPP19 PPP2R2B Ser62 Ser67u",
"maps_to": "cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.nuc_ensa_arpp19_ppp2r2b_ser62_ser67u",
"description": "Tracks Nuc ENSA ARPP19 PPP2R2B Ser62 Ser67u in the lab model via `cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.nuc_ensa_arpp19_ppp2r2b_ser62_ser67u`."
},
{
"name": "nuc_ensa_arpp19_ppp2r2b_ser62_ser67p",
"label": "Nuc ENSA ARPP19 PPP2R2B Ser62 Ser67p",
"maps_to": "cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.nuc_ensa_arpp19_ppp2r2b_ser62_ser67p",
"description": "Tracks Nuc ENSA ARPP19 PPP2R2B Ser62 Ser67p in the lab model via `cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.nuc_ensa_arpp19_ppp2r2b_ser62_ser67p`."
},
{
"name": "nuc_ensa_arpp19_ppp2r2b_1_ser62_ser67p_ppp2r2b_ensa_arpp19_1",
"label": "Nuc ENSA ARPP19 PPP2R2B 1 Ser62 Ser67p PPP2R2B ENSA ARPP19 1",
"maps_to": "cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.nuc_ensa_arpp19_ppp2r2b_1_ser62_ser67p_ppp2r2b_ensa_arpp19_1",
"description": "Tracks Nuc ENSA ARPP19 PPP2R2B 1 Ser62 Ser67p PPP2R2B ENSA ARPP19 1 in the lab model via `cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.nuc_ensa_arpp19_ppp2r2b_1_ser62_ser67p_ppp2r2b_ensa_arpp19_1`."
},
{
"name": "nuc_cyclin_e_promoter_e2f",
"label": "Nuc Cyclin E Promoter E2F",
"maps_to": "cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.nuc_cyclin_e_promoter_e2f",
"description": "Tracks Nuc Cyclin E Promoter E2F in the lab model via `cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.nuc_cyclin_e_promoter_e2f`."
},
{
"name": "nuc_cyclin_active_promoter_e2f",
"label": "Nuc Cyclin Active Promoter E2F",
"maps_to": "cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.nuc_cyclin_active_promoter_e2f",
"description": "Tracks Nuc Cyclin Active Promoter E2F in the lab model via `cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.nuc_cyclin_active_promoter_e2f`."
},
{
"name": "nuc_e2f_promoter_e2f",
"label": "Nuc E2F Promoter E2F",
"maps_to": "cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.nuc_e2f_promoter_e2f",
"description": "Tracks Nuc E2F Promoter E2F in the lab model via `cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.nuc_e2f_promoter_e2f`."
},
{
"name": "nuc_fbxo5_promoter_e2f",
"label": "Nuc FBXO5 Promoter E2F",
"maps_to": "cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.nuc_fbxo5_promoter_e2f",
"description": "Tracks Nuc FBXO5 Promoter E2F in the lab model via `cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.nuc_fbxo5_promoter_e2f`."
},
{
"name": "nuc_foxm1_promoter_e2f",
"label": "Nuc FOXM1 Promoter E2F",
"maps_to": "cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.nuc_foxm1_promoter_e2f",
"description": "Tracks Nuc FOXM1 Promoter E2F in the lab model via `cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.nuc_foxm1_promoter_e2f`."
},
{
"name": "nuc_cyclin_e_promoter_e2f_1_e2f_dbd_1_rb1_ser332u",
"label": "Nuc Cyclin E Promoter E2F 1 E2F DBD 1 Rb1 Ser332u",
"maps_to": "cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.nuc_cyclin_e_promoter_e2f_1_e2f_dbd_1_rb1_ser332u",
"description": "Tracks Nuc Cyclin E Promoter E2F 1 E2F DBD 1 Rb1 Ser332u in the lab model via `cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.nuc_cyclin_e_promoter_e2f_1_e2f_dbd_1_rb1_ser332u`."
},
{
"name": "nuc_cyclin_active_promoter_e2f_1_e2f_dbd_1_rb1_ser332u",
"label": "Nuc Cyclin Active Promoter E2F 1 E2F DBD 1 Rb1 Ser332u",
"maps_to": "cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.nuc_cyclin_active_promoter_e2f_1_e2f_dbd_1_rb1_ser332u",
"description": "Tracks Nuc Cyclin Active Promoter E2F 1 E2F DBD 1 Rb1 Ser332u in the lab model via `cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.nuc_cyclin_active_promoter_e2f_1_e2f_dbd_1_rb1_ser332u`."
},
{
"name": "nuc_e2f_dbd_1_rb1_ser332u_e2f_promoter_e2f_1",
"label": "Nuc E2F DBD 1 Rb1 Ser332u E2F Promoter E2F 1",
"maps_to": "cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.nuc_e2f_dbd_1_rb1_ser332u_e2f_promoter_e2f_1",
"description": "Tracks Nuc E2F DBD 1 Rb1 Ser332u E2F Promoter E2F 1 in the lab model via `cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.nuc_e2f_dbd_1_rb1_ser332u_e2f_promoter_e2f_1`."
},
{
"name": "nuc_e2f_dbd_1_rb1_ser332u_fbxo5_promoter_e2f_1",
"label": "Nuc E2F DBD 1 Rb1 Ser332u FBXO5 Promoter E2F 1",
"maps_to": "cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.nuc_e2f_dbd_1_rb1_ser332u_fbxo5_promoter_e2f_1",
"description": "Tracks Nuc E2F DBD 1 Rb1 Ser332u FBXO5 Promoter E2F 1 in the lab model via `cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.nuc_e2f_dbd_1_rb1_ser332u_fbxo5_promoter_e2f_1`."
},
{
"name": "nuc_e2f_dbd_1_rb1_ser332u_foxm1_promoter_e2f_1",
"label": "Nuc E2F DBD 1 Rb1 Ser332u FOXM1 Promoter E2F 1",
"maps_to": "cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.nuc_e2f_dbd_1_rb1_ser332u_foxm1_promoter_e2f_1",
"description": "Tracks Nuc E2F DBD 1 Rb1 Ser332u FOXM1 Promoter E2F 1 in the lab model via `cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.nuc_e2f_dbd_1_rb1_ser332u_foxm1_promoter_e2f_1`."
},
{
"name": "nuc_cyclin_e_promoter_e2f_1_e2f_dbd_1_rb1_ser332p",
"label": "Nuc Cyclin E Promoter E2F 1 E2F DBD 1 Rb1 Ser332p",
"maps_to": "cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.nuc_cyclin_e_promoter_e2f_1_e2f_dbd_1_rb1_ser332p",
"description": "Tracks Nuc Cyclin E Promoter E2F 1 E2F DBD 1 Rb1 Ser332p in the lab model via `cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.nuc_cyclin_e_promoter_e2f_1_e2f_dbd_1_rb1_ser332p`."
},
{
"name": "nuc_cyclin_active_promoter_e2f_1_e2f_dbd_1_rb1_ser332p",
"label": "Nuc Cyclin Active Promoter E2F 1 E2F DBD 1 Rb1 Ser332p",
"maps_to": "cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.nuc_cyclin_active_promoter_e2f_1_e2f_dbd_1_rb1_ser332p",
"description": "Tracks Nuc Cyclin Active Promoter E2F 1 E2F DBD 1 Rb1 Ser332p in the lab model via `cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.nuc_cyclin_active_promoter_e2f_1_e2f_dbd_1_rb1_ser332p`."
},
{
"name": "nuc_e2f_dbd_1_rb1_ser332p_e2f_promoter_e2f_1",
"label": "Nuc E2F DBD 1 Rb1 Ser332p E2F Promoter E2F 1",
"maps_to": "cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.nuc_e2f_dbd_1_rb1_ser332p_e2f_promoter_e2f_1",
"description": "Tracks Nuc E2F DBD 1 Rb1 Ser332p E2F Promoter E2F 1 in the lab model via `cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.nuc_e2f_dbd_1_rb1_ser332p_e2f_promoter_e2f_1`."
},
{
"name": "nuc_e2f_dbd_1_rb1_ser332p_fbxo5_promoter_e2f_1",
"label": "Nuc E2F DBD 1 Rb1 Ser332p FBXO5 Promoter E2F 1",
"maps_to": "cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.nuc_e2f_dbd_1_rb1_ser332p_fbxo5_promoter_e2f_1",
"description": "Tracks Nuc E2F DBD 1 Rb1 Ser332p FBXO5 Promoter E2F 1 in the lab model via `cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.nuc_e2f_dbd_1_rb1_ser332p_fbxo5_promoter_e2f_1`."
},
{
"name": "nuc_e2f_dbd_1_rb1_ser332p_foxm1_promoter_e2f_1",
"label": "Nuc E2F DBD 1 Rb1 Ser332p FOXM1 Promoter E2F 1",
"maps_to": "cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.nuc_e2f_dbd_1_rb1_ser332p_foxm1_promoter_e2f_1",
"description": "Tracks Nuc E2F DBD 1 Rb1 Ser332p FOXM1 Promoter E2F 1 in the lab model via `cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.nuc_e2f_dbd_1_rb1_ser332p_foxm1_promoter_e2f_1`."
},
{
"name": "nuc_skp2",
"label": "Nuc SKP2",
"maps_to": "cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.nuc_skp2",
"description": "Tracks Nuc SKP2 in the lab model via `cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.nuc_skp2`."
},
{
"name": "nuc_tp53_dbd_ser15p",
"label": "Nuc TP53 DBD Ser15p",
"maps_to": "cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.nuc_tp53_dbd_ser15p",
"description": "Tracks Nuc TP53 DBD Ser15p in the lab model via `cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.nuc_tp53_dbd_ser15p`."
},
{
"name": "nuc_cdkn1a_promoter_tp53",
"label": "Nuc CDKN1A Promoter TP53",
"maps_to": "cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.nuc_cdkn1a_promoter_tp53",
"description": "Tracks Nuc CDKN1A Promoter TP53 in the lab model via `cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.nuc_cdkn1a_promoter_tp53`."
},
{
"name": "nuc_foxo_dbd",
"label": "Nuc FOXO DBD",
"maps_to": "cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.nuc_foxo_dbd",
"description": "Tracks Nuc FOXO DBD in the lab model via `cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.nuc_foxo_dbd`."
},
{
"name": "nuc_cdkn1b_promoter_foxo",
"label": "Nuc CDKN1B Promoter FOXO",
"maps_to": "cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.nuc_cdkn1b_promoter_foxo",
"description": "Tracks Nuc CDKN1B Promoter FOXO in the lab model via `cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.nuc_cdkn1b_promoter_foxo`."
},
{
"name": "nuc_cdkn1a_promoter_tp53_1_tp53_dbd_1_ser15p",
"label": "Nuc CDKN1A Promoter TP53 1 TP53 DBD 1 Ser15p",
"maps_to": "cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.nuc_cdkn1a_promoter_tp53_1_tp53_dbd_1_ser15p",
"description": "Tracks Nuc CDKN1A Promoter TP53 1 TP53 DBD 1 Ser15p in the lab model via `cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.nuc_cdkn1a_promoter_tp53_1_tp53_dbd_1_ser15p`."
},
{
"name": "cyt_cdkn1a_cyclin_e_active_b_ser130u",
"label": "Cyt CDKN1A Cyclin E Active B Ser130u",
"maps_to": "cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.cyt_cdkn1a_cyclin_e_active_b_ser130u",
"description": "Tracks Cyt CDKN1A Cyclin E Active B Ser130u in the lab model via `cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.cyt_cdkn1a_cyclin_e_active_b_ser130u`."
},
{
"name": "nuc_cdkn1b_promoter_foxo_1_foxo_dbd_1",
"label": "Nuc CDKN1B Promoter FOXO 1 FOXO DBD 1",
"maps_to": "cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.nuc_cdkn1b_promoter_foxo_1_foxo_dbd_1",
"description": "Tracks Nuc CDKN1B Promoter FOXO 1 FOXO DBD 1 in the lab model via `cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.nuc_cdkn1b_promoter_foxo_1_foxo_dbd_1`."
},
{
"name": "cyt_cdkn1b_cyclin_e_active_thr187u",
"label": "Cyt CDKN1B Cyclin E Active Thr187u",
"maps_to": "cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.cyt_cdkn1b_cyclin_e_active_thr187u",
"description": "Tracks Cyt CDKN1B Cyclin E Active Thr187u in the lab model via `cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.cyt_cdkn1b_cyclin_e_active_thr187u`."
},
{
"name": "cyt_cyclin_active_cdkn1a_b_1_cdkn1a_cyclin_e_active_b_1_ser130u",
"label": "Cyt Cyclin Active CDKN1A B 1 CDKN1A Cyclin E Active B 1 Ser130u",
"maps_to": "cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.cyt_cyclin_active_cdkn1a_b_1_cdkn1a_cyclin_e_active_b_1_ser130u",
"description": "Tracks Cyt Cyclin Active CDKN1A B 1 CDKN1A Cyclin E Active B 1 Ser130u in the lab model via `cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.cyt_cyclin_active_cdkn1a_b_1_cdkn1a_cyclin_e_active_b_1_ser130u`."
},
{
"name": "cyt_cyclin_e_cdkn1a_b_1_cdkn1a_cyclin_e_active_b_1_ser130u",
"label": "Cyt Cyclin E CDKN1A B 1 CDKN1A Cyclin E Active B 1 Ser130u",
"maps_to": "cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.cyt_cyclin_e_cdkn1a_b_1_cdkn1a_cyclin_e_active_b_1_ser130u",
"description": "Tracks Cyt Cyclin E CDKN1A B 1 CDKN1A Cyclin E Active B 1 Ser130u in the lab model via `cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.cyt_cyclin_e_cdkn1a_b_1_cdkn1a_cyclin_e_active_b_1_ser130u`."
},
{
"name": "cyt_cyclin_b_cdk1_thr14_tyr15u_cdkn1a_1_cdkn1a_cyclin_e_active_b_1_ser130u",
"label": "Cyt Cyclin B CDK1 Thr14 Tyr15u CDKN1A 1 CDKN1A Cyclin E Active B 1 Ser130u",
"maps_to": "cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.cyt_cyclin_b_cdk1_thr14_tyr15u_cdkn1a_1_cdkn1a_cyclin_e_active_b_1_ser130u",
"description": "Tracks Cyt Cyclin B CDK1 Thr14 Tyr15u CDKN1A 1 CDKN1A Cyclin E Active B 1 Ser130u in the lab model via `cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.cyt_cyclin_b_cdk1_thr14_tyr15u_cdkn1a_1_cdkn1a_cyclin_e_active_b_1_ser130u`."
},
{
"name": "cyt_cyclin_b_cdk1_thr14_tyr15p_cdkn1a_1_cdkn1a_cyclin_e_active_b_1_ser130u",
"label": "Cyt Cyclin B CDK1 Thr14 Tyr15p CDKN1A 1 CDKN1A Cyclin E Active B 1 Ser130u",
"maps_to": "cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.cyt_cyclin_b_cdk1_thr14_tyr15p_cdkn1a_1_cdkn1a_cyclin_e_active_b_1_ser130u",
"description": "Tracks Cyt Cyclin B CDK1 Thr14 Tyr15p CDKN1A 1 CDKN1A Cyclin E Active B 1 Ser130u in the lab model via `cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.cyt_cyclin_b_cdk1_thr14_tyr15p_cdkn1a_1_cdkn1a_cyclin_e_active_b_1_ser130u`."
},
{
"name": "cyt_cdkn1a_cyclin_e_active_b_ser130p",
"label": "Cyt CDKN1A Cyclin E Active B Ser130p",
"maps_to": "cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.cyt_cdkn1a_cyclin_e_active_b_ser130p",
"description": "Tracks Cyt CDKN1A Cyclin E Active B Ser130p in the lab model via `cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.cyt_cdkn1a_cyclin_e_active_b_ser130p`."
},
{
"name": "cyt_cyclin_active_cdkn1a_b_1_cdkn1b_cyclin_e_a_1_thr187u",
"label": "Cyt Cyclin Active CDKN1A B 1 CDKN1B Cyclin E A 1 Thr187u",
"maps_to": "cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.cyt_cyclin_active_cdkn1a_b_1_cdkn1b_cyclin_e_a_1_thr187u",
"description": "Tracks Cyt Cyclin Active CDKN1A B 1 CDKN1B Cyclin E A 1 Thr187u in the lab model via `cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.cyt_cyclin_active_cdkn1a_b_1_cdkn1b_cyclin_e_a_1_thr187u`."
},
{
"name": "cyt_cyclin_e_cdkn1a_b_1_cdkn1b_cyclin_e_a_1_thr187u",
"label": "Cyt Cyclin E CDKN1A B 1 CDKN1B Cyclin E A 1 Thr187u",
"maps_to": "cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.cyt_cyclin_e_cdkn1a_b_1_cdkn1b_cyclin_e_a_1_thr187u",
"description": "Tracks Cyt Cyclin E CDKN1A B 1 CDKN1B Cyclin E A 1 Thr187u in the lab model via `cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.cyt_cyclin_e_cdkn1a_b_1_cdkn1b_cyclin_e_a_1_thr187u`."
},
{
"name": "cyt_cdkn1b_cyclin_e_active_thr187p",
"label": "Cyt CDKN1B Cyclin E Active Thr187p",
"maps_to": "cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.cyt_cdkn1b_cyclin_e_active_thr187p",
"description": "Tracks Cyt CDKN1B Cyclin E Active Thr187p in the lab model via `cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.cyt_cdkn1b_cyclin_e_active_thr187p`."
},
{
"name": "nuc_cdkn1a_cyclin_e_active_b_ser130u",
"label": "Nuc CDKN1A Cyclin E Active B Ser130u",
"maps_to": "cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.nuc_cdkn1a_cyclin_e_active_b_ser130u",
"description": "Tracks Nuc CDKN1A Cyclin E Active B Ser130u in the lab model via `cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.nuc_cdkn1a_cyclin_e_active_b_ser130u`."
},
{
"name": "nuc_cdkn1b_cyclin_e_active_thr187u",
"label": "Nuc CDKN1B Cyclin E Active Thr187u",
"maps_to": "cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.nuc_cdkn1b_cyclin_e_active_thr187u",
"description": "Tracks Nuc CDKN1B Cyclin E Active Thr187u in the lab model via `cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.nuc_cdkn1b_cyclin_e_active_thr187u`."
},
{
"name": "nuc_cyclin_active_cdkn1a_b_1_cdkn1a_cyclin_e_active_b_1_ser130u",
"label": "Nuc Cyclin Active CDKN1A B 1 CDKN1A Cyclin E Active B 1 Ser130u",
"maps_to": "cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.nuc_cyclin_active_cdkn1a_b_1_cdkn1a_cyclin_e_active_b_1_ser130u",
"description": "Tracks Nuc Cyclin Active CDKN1A B 1 CDKN1A Cyclin E Active B 1 Ser130u in the lab model via `cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.nuc_cyclin_active_cdkn1a_b_1_cdkn1a_cyclin_e_active_b_1_ser130u`."
},
{
"name": "nuc_cyclin_e_cdkn1a_b_1_cdkn1a_cyclin_e_active_b_1_ser130u",
"label": "Nuc Cyclin E CDKN1A B 1 CDKN1A Cyclin E Active B 1 Ser130u",
"maps_to": "cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.nuc_cyclin_e_cdkn1a_b_1_cdkn1a_cyclin_e_active_b_1_ser130u",
"description": "Tracks Nuc Cyclin E CDKN1A B 1 CDKN1A Cyclin E Active B 1 Ser130u in the lab model via `cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.nuc_cyclin_e_cdkn1a_b_1_cdkn1a_cyclin_e_active_b_1_ser130u`."
},
{
"name": "nuc_cyclin_b_cdk1_thr14_tyr15u_cdkn1a_1_cdkn1a_cyclin_e_active_b_1_ser130u",
"label": "Nuc Cyclin B CDK1 Thr14 Tyr15u CDKN1A 1 CDKN1A Cyclin E Active B 1 Ser130u",
"maps_to": "cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.nuc_cyclin_b_cdk1_thr14_tyr15u_cdkn1a_1_cdkn1a_cyclin_e_active_b_1_ser130u",
"description": "Tracks Nuc Cyclin B CDK1 Thr14 Tyr15u CDKN1A 1 CDKN1A Cyclin E Active B 1 Ser130u in the lab model via `cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.nuc_cyclin_b_cdk1_thr14_tyr15u_cdkn1a_1_cdkn1a_cyclin_e_active_b_1_ser130u`."
},
{
"name": "nuc_cyclin_b_cdk1_thr14_tyr15p_cdkn1a_1_cdkn1a_cyclin_e_active_b_1_ser130u",
"label": "Nuc Cyclin B CDK1 Thr14 Tyr15p CDKN1A 1 CDKN1A Cyclin E Active B 1 Ser130u",
"maps_to": "cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.nuc_cyclin_b_cdk1_thr14_tyr15p_cdkn1a_1_cdkn1a_cyclin_e_active_b_1_ser130u",
"description": "Tracks Nuc Cyclin B CDK1 Thr14 Tyr15p CDKN1A 1 CDKN1A Cyclin E Active B 1 Ser130u in the lab model via `cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.nuc_cyclin_b_cdk1_thr14_tyr15p_cdkn1a_1_cdkn1a_cyclin_e_active_b_1_ser130u`."
},
{
"name": "nuc_cdkn1a_cyclin_e_active_b_ser130p",
"label": "Nuc CDKN1A Cyclin E Active B Ser130p",
"maps_to": "cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.nuc_cdkn1a_cyclin_e_active_b_ser130p",
"description": "Tracks Nuc CDKN1A Cyclin E Active B Ser130p in the lab model via `cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.nuc_cdkn1a_cyclin_e_active_b_ser130p`."
},
{
"name": "cyt_cyclin_active_cdkn1a_b_1_cdkn1b_cyclin_e_a_1_thr187p",
"label": "Cyt Cyclin Active CDKN1A B 1 CDKN1B Cyclin E A 1 Thr187p",
"maps_to": "cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.cyt_cyclin_active_cdkn1a_b_1_cdkn1b_cyclin_e_a_1_thr187p",
"description": "Tracks Cyt Cyclin Active CDKN1A B 1 CDKN1B Cyclin E A 1 Thr187p in the lab model via `cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.cyt_cyclin_active_cdkn1a_b_1_cdkn1b_cyclin_e_a_1_thr187p`."
},
{
"name": "nuc_cyclin_active_cdkn1a_b_1_cdkn1b_cyclin_e_a_1_thr187u",
"label": "Nuc Cyclin Active CDKN1A B 1 CDKN1B Cyclin E A 1 Thr187u",
"maps_to": "cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.nuc_cyclin_active_cdkn1a_b_1_cdkn1b_cyclin_e_a_1_thr187u",
"description": "Tracks Nuc Cyclin Active CDKN1A B 1 CDKN1B Cyclin E A 1 Thr187u in the lab model via `cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.nuc_cyclin_active_cdkn1a_b_1_cdkn1b_cyclin_e_a_1_thr187u`."
},
{
"name": "cyt_cyclin_e_cdkn1a_b_1_cdkn1b_cyclin_e_a_1_thr187p",
"label": "Cyt Cyclin E CDKN1A B 1 CDKN1B Cyclin E A 1 Thr187p",
"maps_to": "cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.cyt_cyclin_e_cdkn1a_b_1_cdkn1b_cyclin_e_a_1_thr187p",
"description": "Tracks Cyt Cyclin E CDKN1A B 1 CDKN1B Cyclin E A 1 Thr187p in the lab model via `cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.cyt_cyclin_e_cdkn1a_b_1_cdkn1b_cyclin_e_a_1_thr187p`."
},
{
"name": "nuc_cyclin_e_cdkn1a_b_1_cdkn1b_cyclin_e_a_1_thr187u",
"label": "Nuc Cyclin E CDKN1A B 1 CDKN1B Cyclin E A 1 Thr187u",
"maps_to": "cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.nuc_cyclin_e_cdkn1a_b_1_cdkn1b_cyclin_e_a_1_thr187u",
"description": "Tracks Nuc Cyclin E CDKN1A B 1 CDKN1B Cyclin E A 1 Thr187u in the lab model via `cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.nuc_cyclin_e_cdkn1a_b_1_cdkn1b_cyclin_e_a_1_thr187u`."
},
{
"name": "nuc_cdkn1b_cyclin_e_active_thr187p",
"label": "Nuc CDKN1B Cyclin E Active Thr187p",
"maps_to": "cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.nuc_cdkn1b_cyclin_e_active_thr187p",
"description": "Tracks Nuc CDKN1B Cyclin E Active Thr187p in the lab model via `cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.nuc_cdkn1b_cyclin_e_active_thr187p`."
},
{
"name": "nuc_cyclin_active_cdkn1a_b_1_cdkn1b_cyclin_e_a_1_thr187p",
"label": "Nuc Cyclin Active CDKN1A B 1 CDKN1B Cyclin E A 1 Thr187p",
"maps_to": "cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.nuc_cyclin_active_cdkn1a_b_1_cdkn1b_cyclin_e_a_1_thr187p",
"description": "Tracks Nuc Cyclin Active CDKN1A B 1 CDKN1B Cyclin E A 1 Thr187p in the lab model via `cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.nuc_cyclin_active_cdkn1a_b_1_cdkn1b_cyclin_e_a_1_thr187p`."
},
{
"name": "nuc_cyclin_e_cdkn1a_b_1_cdkn1b_cyclin_e_a_1_thr187p",
"label": "Nuc Cyclin E CDKN1A B 1 CDKN1B Cyclin E A 1 Thr187p",
"maps_to": "cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.nuc_cyclin_e_cdkn1a_b_1_cdkn1b_cyclin_e_a_1_thr187p",
"description": "Tracks Nuc Cyclin E CDKN1A B 1 CDKN1B Cyclin E A 1 Thr187p in the lab model via `cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.nuc_cyclin_e_cdkn1a_b_1_cdkn1b_cyclin_e_a_1_thr187p`."
}
]
},
"title": "Lang2024 - Cell cycle model explains compartment-resolved dynamics of 16 observables in RPE1 cells Lab",
"models": [
{
"path": "models/core",
"alias": "cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model"
},
{
"path": "models/visualisation",
"alias": "visualisation"
}
],
"wiring": [
{
"to": [
"visualisation.cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model_state"
],
"from": "cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.state"
},
{
"to": [
"visualisation.cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model_summary"
],
"from": "cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.summary"
},
{
"to": [
"visualisation.cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model_species_labels"
],
"from": "cellcycle_sbml_lang2024_cell_cycle_model_explains_compartment_r_model2401050001_model.species_labels"
}
],
"package": "lang2024-rpe1-compartment-dynamics",
"runtime": {
"duration": 10,
"initial_inputs": {},
"communication_step": 1
},
"version": "1.0.0",
"description": "Single-model lab wrapper for Lang2024 - Cell cycle model explains compartment-resolved dynamics of 16 observables in RPE1 cells. This model provides a molecularly detailed description of the biochemical reaction networks governing the mammalian cell cycle, including the restriction point, the G1S, G2/M and metaphase/anaphase tr. It can be used to explore cell-cycle regulation dynamics and compare checkpoint behavior across conditions.",
"schema_version": "2.0"
}Runtime
Duration10
Comms Step1
Runs
Total0
Completed0
Failed0
Metadata
Packagelang2024-rpe1-compartment-dynamics
Created2026-05-15
Updated2026-06-13
cellcyclesbmlbiomodels_ebifaithfulvisualisationother