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Sivakumar2011_NeuralStemCellDifferentiation_Crosstalk This model is generated by integrating BIOMD0000000394 (EGFR), BIOMD0000000395 (Hedgehog), BIOMD0000000396 (Notch) and BIOMD0000000397 (Wnt), to i. It can be used to explore systemsbiology sivakumar2011 neuralstemcelldifferenti cros BioModels0000000398 dynamics and compare simulation behavior across conditions.
Manifest
{
"io": {
"inputs": [
{
"name": "initial_erlotinib",
"label": "Initial Erlotinib",
"maps_to": "systemsbiology_sbml_sivakumar2011_neuralstemcelldifferentiation_cros_biomd0000000398_model.initial_erlotinib",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `s101`."
},
{
"name": "initial_dapt",
"label": "Initial Dapt",
"maps_to": "systemsbiology_sbml_sivakumar2011_neuralstemcelldifferentiation_cros_biomd0000000398_model.initial_dapt",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `s61`."
},
{
"name": "initial_model_state_6_bromoindirubin_3_oxime",
"label": "Initial Model State 6 Bromoindirubin 3 Oxime",
"maps_to": "systemsbiology_sbml_sivakumar2011_neuralstemcelldifferentiation_cros_biomd0000000398_model.initial_model_state_6_bromoindirubin_3_oxime",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `s147`."
},
{
"name": "initial_model_state_smo",
"label": "Initial Model State Smo",
"maps_to": "systemsbiology_sbml_sivakumar2011_neuralstemcelldifferentiation_cros_biomd0000000398_model.initial_model_state_smo",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `s88`."
},
{
"name": "initial_model_state_wnt",
"label": "Initial Model State Wnt",
"maps_to": "systemsbiology_sbml_sivakumar2011_neuralstemcelldifferentiation_cros_biomd0000000398_model.initial_model_state_wnt",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `s107`."
},
{
"name": "initial_model_state_shh",
"label": "Initial Model State Shh",
"maps_to": "systemsbiology_sbml_sivakumar2011_neuralstemcelldifferentiation_cros_biomd0000000398_model.initial_model_state_shh",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `s81`."
}
],
"outputs": [
{
"name": "state",
"maps_to": "systemsbiology_sbml_sivakumar2011_neuralstemcelldifferentiation_cros_biomd0000000398_model.state"
},
{
"name": "summary",
"maps_to": "systemsbiology_sbml_sivakumar2011_neuralstemcelldifferentiation_cros_biomd0000000398_model.summary"
},
{
"name": "species_labels",
"maps_to": "systemsbiology_sbml_sivakumar2011_neuralstemcelldifferentiation_cros_biomd0000000398_model.species_labels"
},
{
"name": "erlotinib",
"maps_to": "systemsbiology_sbml_sivakumar2011_neuralstemcelldifferentiation_cros_biomd0000000398_model.erlotinib"
},
{
"name": "dapt",
"maps_to": "systemsbiology_sbml_sivakumar2011_neuralstemcelldifferentiation_cros_biomd0000000398_model.dapt"
},
{
"name": "model_state_6_bromoindirubin_3_oxime",
"maps_to": "systemsbiology_sbml_sivakumar2011_neuralstemcelldifferentiation_cros_biomd0000000398_model.model_state_6_bromoindirubin_3_oxime"
},
{
"name": "smo",
"maps_to": "systemsbiology_sbml_sivakumar2011_neuralstemcelldifferentiation_cros_biomd0000000398_model.smo"
},
{
"name": "wnt",
"maps_to": "systemsbiology_sbml_sivakumar2011_neuralstemcelldifferentiation_cros_biomd0000000398_model.wnt"
},
{
"name": "shh",
"maps_to": "systemsbiology_sbml_sivakumar2011_neuralstemcelldifferentiation_cros_biomd0000000398_model.shh"
}
]
},
"tags": [
"generegulation",
"signaling",
"systemsbiology",
"sbml",
"biomodels_ebi",
"faithful",
"curated"
],
"title": "Sivakumar2011 Neuralstemcelldifferentiation Crosstalk Lab",
"models": [
{
"path": "models/core",
"alias": "systemsbiology_sbml_sivakumar2011_neuralstemcelldifferentiation_cros_biomd0000000398_model"
},
{
"path": "models/visualisation",
"alias": "visualisation"
}
],
"wiring": [
{
"to": [
"visualisation.systemsbiology_sbml_sivakumar2011_neuralstemcelldifferentiation_cros_biomd0000000398_model_state"
],
"from": "systemsbiology_sbml_sivakumar2011_neuralstemcelldifferentiation_cros_biomd0000000398_model.state"
},
{
"to": [
"visualisation.systemsbiology_sbml_sivakumar2011_neuralstemcelldifferentiation_cros_biomd0000000398_model_summary"
],
"from": "systemsbiology_sbml_sivakumar2011_neuralstemcelldifferentiation_cros_biomd0000000398_model.summary"
},
{
"to": [
"visualisation.systemsbiology_sbml_sivakumar2011_neuralstemcelldifferentiation_cros_biomd0000000398_model_species_labels"
],
"from": "systemsbiology_sbml_sivakumar2011_neuralstemcelldifferentiation_cros_biomd0000000398_model.species_labels"
}
],
"package": "sivakumar2011-neuralstemcelldifferentiation-crosstalk",
"runtime": {
"duration": 1,
"initial_inputs": {},
"communication_step": 0.1
},
"version": "1.0.0",
"description": "Sivakumar2011_NeuralStemCellDifferentiation_Crosstalk This model is generated by integrating BIOMD0000000394 (EGFR), BIOMD0000000395 (Hedgehog), BIOMD0000000396 (Notch) and BIOMD0000000397 (Wnt), to i. It can be used to explore systemsbiology sivakumar2011 neuralstemcelldifferenti cros BioModels0000000398 dynamics and compare simulation behavior across conditions.",
"schema_version": "2.0"
}Runtime
Duration1
Comms Step0.1
Runs
Total0
Completed0
Failed0
Metadata
Packagesivakumar2011-neuralstemcelldifferentiation-crosstalk
Created2026-05-17
Updated2026-06-13
generegulationsignalingsystemsbiologysbmlbiomodels_ebifaithfulcuratedvisualisationother