Liu2012-Hybrid modeling and simulation of stochastic effects on progression through the eukaryotic cell cycle. Lab
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Single-model lab wrapper for Liu2012-Hybrid modeling and simulation of stochastic effects on progression through the eukaryotic cell cycle.. The eukaryotic cell cycle is regulated by a complicated chemical reaction network. Although many deterministic models have been proposed, stochastic models are desired to capture noise in the cell res.
Manifest
{
"io": {
"inputs": [],
"outputs": [
{
"name": "model_state_x_x",
"label": "Model state X (X)",
"maps_to": "cellcycle_sbml_liu2012_hybrid_modeling_and_simulation_of_stocha_model2004140002_model.model_state_x_x",
"description": "Tracks Model state X (X) in the lab model via `cellcycle_sbml_liu2012_hybrid_modeling_and_simulation_of_stocha_model2004140002_model.model_state_x_x`."
},
{
"name": "model_state_v_v",
"label": "Model state V (V)",
"maps_to": "cellcycle_sbml_liu2012_hybrid_modeling_and_simulation_of_stocha_model2004140002_model.model_state_v_v",
"description": "Tracks Model state V (V) in the lab model via `cellcycle_sbml_liu2012_hybrid_modeling_and_simulation_of_stocha_model2004140002_model.model_state_v_v`."
},
{
"name": "model_state_y_y",
"label": "Model state Y (Y)",
"maps_to": "cellcycle_sbml_liu2012_hybrid_modeling_and_simulation_of_stocha_model2004140002_model.model_state_y_y",
"description": "Tracks Model state Y (Y) in the lab model via `cellcycle_sbml_liu2012_hybrid_modeling_and_simulation_of_stocha_model2004140002_model.model_state_y_y`."
},
{
"name": "model_state_z_z",
"label": "Model state Z (Z)",
"maps_to": "cellcycle_sbml_liu2012_hybrid_modeling_and_simulation_of_stocha_model2004140002_model.model_state_z_z",
"description": "Tracks Model state Z (Z) in the lab model via `cellcycle_sbml_liu2012_hybrid_modeling_and_simulation_of_stocha_model2004140002_model.model_state_z_z`."
},
{
"name": "model_state_yt",
"label": "Model state YT",
"maps_to": "cellcycle_sbml_liu2012_hybrid_modeling_and_simulation_of_stocha_model2004140002_model.model_state_yt",
"description": "Tracks Model state YT in the lab model via `cellcycle_sbml_liu2012_hybrid_modeling_and_simulation_of_stocha_model2004140002_model.model_state_yt`."
},
{
"name": "model_state_mx",
"label": "Model state Mx",
"maps_to": "cellcycle_sbml_liu2012_hybrid_modeling_and_simulation_of_stocha_model2004140002_model.model_state_mx",
"description": "Tracks Model state Mx in the lab model via `cellcycle_sbml_liu2012_hybrid_modeling_and_simulation_of_stocha_model2004140002_model.model_state_mx`."
},
{
"name": "model_state_my",
"label": "Model state My",
"maps_to": "cellcycle_sbml_liu2012_hybrid_modeling_and_simulation_of_stocha_model2004140002_model.model_state_my",
"description": "Tracks Model state My in the lab model via `cellcycle_sbml_liu2012_hybrid_modeling_and_simulation_of_stocha_model2004140002_model.model_state_my`."
},
{
"name": "model_state_mz",
"label": "Model state Mz",
"maps_to": "cellcycle_sbml_liu2012_hybrid_modeling_and_simulation_of_stocha_model2004140002_model.model_state_mz",
"description": "Tracks Model state Mz in the lab model via `cellcycle_sbml_liu2012_hybrid_modeling_and_simulation_of_stocha_model2004140002_model.model_state_mz`."
}
]
},
"title": "Liu2012-Hybrid modeling and simulation of stochastic effects on progression through the eukaryotic cell cycle. Lab",
"models": [
{
"path": "models/core",
"alias": "cellcycle_sbml_liu2012_hybrid_modeling_and_simulation_of_stocha_model2004140002_model"
},
{
"path": "models/visualisation",
"alias": "visualisation"
}
],
"wiring": [
{
"to": [
"visualisation.cellcycle_sbml_liu2012_hybrid_modeling_and_simulation_of_stocha_model2004140002_model_state"
],
"from": "cellcycle_sbml_liu2012_hybrid_modeling_and_simulation_of_stocha_model2004140002_model.state"
},
{
"to": [
"visualisation.cellcycle_sbml_liu2012_hybrid_modeling_and_simulation_of_stocha_model2004140002_model_summary"
],
"from": "cellcycle_sbml_liu2012_hybrid_modeling_and_simulation_of_stocha_model2004140002_model.summary"
},
{
"to": [
"visualisation.cellcycle_sbml_liu2012_hybrid_modeling_and_simulation_of_stocha_model2004140002_model_species_labels"
],
"from": "cellcycle_sbml_liu2012_hybrid_modeling_and_simulation_of_stocha_model2004140002_model.species_labels"
}
],
"package": "liu2012-stochastic-cell-cycle",
"runtime": {
"duration": 10,
"initial_inputs": {},
"communication_step": 1
},
"version": "1.0.0",
"description": "Single-model lab wrapper for Liu2012-Hybrid modeling and simulation of stochastic effects on progression through the eukaryotic cell cycle.. The eukaryotic cell cycle is regulated by a complicated chemical reaction network. Although many deterministic models have been proposed, stochastic models are desired to capture noise in the cell res.",
"schema_version": "2.0"
}Runtime
Duration10
Comms Step1
Runs
Total0
Completed0
Failed0
Metadata
Packageliu2012-stochastic-cell-cycle
Created2026-05-15
Updated2026-06-13
cellcyclesbmlbiomodels_ebifaithfulvisualisationother