Calzone2007 - Dynamical Modeling Syncytial Mitotic Cycles Drosophila Lab

{
  "io": {
    "inputs": [
      {
        "name": "initial_fzy",
        "label": "Initial Fzy",
        "maps_to": "physiology_cellml_calzone_thieffry_tyson_novak_2007_calzonethieffrytysonnovak2007_model.initial_fzy",
        "description": "Initial value for Fzy. Maps to source symbol `FZY`. Units: dimensionless. Naming evidence: source symbol, component, or units provide a direct public name.",
        "accepted_units": [
          "dimensionless"
        ]
      },
      {
        "name": "initial_mitotic_cycle_state_n",
        "label": "Initial Mitotic Cycle State N (source N)",
        "maps_to": "physiology_cellml_calzone_thieffry_tyson_novak_2007_calzonethieffrytysonnovak2007_model.initial_mitotic_cycle_state_n",
        "description": "Initial value for Mitotic Cycle State N (source N). Maps to source symbol `N`. Units: dimensionless. Naming evidence: cell-cycle or mitotic context supports a conservative source-state label.",
        "accepted_units": [
          "dimensionless"
        ]
      }
    ],
    "outputs": [
      {
        "name": "state",
        "label": "Selected Source State",
        "maps_to": "physiology_cellml_calzone_thieffry_tyson_novak_2007_calzonethieffrytysonnovak2007_model.state"
      },
      {
        "name": "summary",
        "label": "Simulation Summary",
        "maps_to": "physiology_cellml_calzone_thieffry_tyson_novak_2007_calzonethieffrytysonnovak2007_model.summary"
      },
      {
        "name": "trajectory",
        "label": "Source Trajectory",
        "maps_to": "physiology_cellml_calzone_thieffry_tyson_novak_2007_calzonethieffrytysonnovak2007_model.trajectory"
      },
      {
        "name": "variable_labels",
        "label": "Observable Labels",
        "maps_to": "physiology_cellml_calzone_thieffry_tyson_novak_2007_calzonethieffrytysonnovak2007_model.variable_labels"
      },
      {
        "name": "fzy",
        "label": "Fzy",
        "maps_to": "physiology_cellml_calzone_thieffry_tyson_novak_2007_calzonethieffrytysonnovak2007_model.fzy",
        "description": "Fzy. Maps to source symbol `FZY`. Units: dimensionless. Naming evidence: source symbol, component, or units provide a direct public name."
      },
      {
        "name": "mitotic_cycle_state_n",
        "label": "Mitotic Cycle State N (source N)",
        "maps_to": "physiology_cellml_calzone_thieffry_tyson_novak_2007_calzonethieffrytysonnovak2007_model.mitotic_cycle_state_n",
        "description": "Mitotic Cycle State N (source N). Maps to source symbol `N`. Units: dimensionless. Naming evidence: cell-cycle or mitotic context supports a conservative source-state label."
      },
      {
        "name": "mitotic_entry_state_ie",
        "label": "Mitotic Entry State Ie (source IE)",
        "maps_to": "physiology_cellml_calzone_thieffry_tyson_novak_2007_calzonethieffrytysonnovak2007_model.mitotic_entry_state_ie",
        "description": "Mitotic Entry State Ie (source IE). Maps to source symbol `IE`. Units: dimensionless. Naming evidence: cell-cycle or mitotic context supports a conservative source-state label."
      },
      {
        "name": "mitotic_state_xm",
        "label": "Mitotic State Xm (source Xm)",
        "maps_to": "physiology_cellml_calzone_thieffry_tyson_novak_2007_calzonethieffrytysonnovak2007_model.mitotic_state_xm",
        "description": "Mitotic State Xm (source Xm). Maps to source symbol `Xm`. Units: dimensionless. Naming evidence: cell-cycle or mitotic context supports a conservative source-state label."
      },
      {
        "name": "mitotic_state_xp",
        "label": "Mitotic State Xp (source Xp)",
        "maps_to": "physiology_cellml_calzone_thieffry_tyson_novak_2007_calzonethieffrytysonnovak2007_model.mitotic_state_xp",
        "description": "Mitotic State Xp (source Xp). Maps to source symbol `Xp`. Units: dimensionless. Naming evidence: cell-cycle or mitotic context supports a conservative source-state label."
      },
      {
        "name": "mpf_c",
        "label": "Mpf C",
        "maps_to": "physiology_cellml_calzone_thieffry_tyson_novak_2007_calzonethieffrytysonnovak2007_model.mpf_c",
        "description": "Mpf C. Maps to source symbol `MPF_c`. Units: dimensionless. Naming evidence: source symbol, component, or units provide a direct public name."
      }
    ]
  },
  "title": "Calzone2007 - Dynamical Modeling Syncytial Mitotic Cycles Drosophila Lab",
  "models": [
    {
      "path": "models/core",
      "alias": "physiology_cellml_calzone_thieffry_tyson_novak_2007_calzonethieffrytysonnovak2007_model",
      "parameters": {
        "model_path": "data/calzone_thieffry_tyson_novak_2007.cellml",
        "integration_step": 0.01
      }
    },
    {
      "path": "models/visualisation",
      "alias": "visualisation"
    }
  ],
  "wiring": [
    {
      "to": [
        "visualisation.physiology_cellml_calzone_thieffry_tyson_novak_2007_calzonethieffrytysonnovak2007_model_state"
      ],
      "from": "physiology_cellml_calzone_thieffry_tyson_novak_2007_calzonethieffrytysonnovak2007_model.state"
    },
    {
      "to": [
        "visualisation.physiology_cellml_calzone_thieffry_tyson_novak_2007_calzonethieffrytysonnovak2007_model_summary"
      ],
      "from": "physiology_cellml_calzone_thieffry_tyson_novak_2007_calzonethieffrytysonnovak2007_model.summary"
    },
    {
      "to": [
        "visualisation.physiology_cellml_calzone_thieffry_tyson_novak_2007_calzonethieffrytysonnovak2007_model_trajectory"
      ],
      "from": "physiology_cellml_calzone_thieffry_tyson_novak_2007_calzonethieffrytysonnovak2007_model.trajectory"
    },
    {
      "to": [
        "visualisation.physiology_cellml_calzone_thieffry_tyson_novak_2007_calzonethieffrytysonnovak2007_model_variable_labels"
      ],
      "from": "physiology_cellml_calzone_thieffry_tyson_novak_2007_calzonethieffrytysonnovak2007_model.variable_labels"
    }
  ],
  "package": "calzone2007-dynamical-modeling-syncytial-mitotic-cycles-9386a36e",
  "runtime": {
    "duration": 0.01,
    "settle_steps": 1,
    "initial_inputs": {},
    "communication_step": 0.01
  },
  "version": "1.0.0",
  "description": "Source-faithful physiology lab for Calzone, Thieffry, Tyson, Novak, 2007. Public controls and outputs are mapped to real source symbols for cell-cycle dynamics.",
  "schema_version": "2.0"
}