About lab
One published Lab
Build with this Lab. Run it anywhere.
Use the same immutable release locally or through managed cloud execution, with its exact version and provenance preserved.
Preparing exact examples…
Clean Biosimulant lab for systems signaling model: Ajay_Bhalla_2007_PKM. Values are native SBML quantities; equations, parameters, and initial values remain in the bundled source file.
Manifest
{
"io": {
"inputs": [
{
"name": "initial_calcium_input",
"label": "Initial calcium Input",
"maps_to": "signaling_sbml_ajay_bhalla_2007_pkm_model9147232940_model.initial_calcium_input",
"description": "Initial level of calcium Input. Maps to SBML symbol `Ca_input`; exposed as a traceable initial-condition perturbation."
},
{
"name": "initial_dag",
"label": "Initial DAG",
"maps_to": "signaling_sbml_ajay_bhalla_2007_pkm_model9147232940_model.initial_dag",
"description": "Initial level of DAG. Maps to SBML symbol `DAG`; exposed as a traceable initial-condition perturbation."
},
{
"name": "initial_active_pkc",
"label": "Initial active PKC",
"maps_to": "signaling_sbml_ajay_bhalla_2007_pkm_model9147232940_model.initial_active_pkc",
"description": "Initial level of active PKC. Maps to SBML symbol `PKC_minus_active`; exposed as a traceable initial-condition perturbation."
}
],
"outputs": [
{
"name": "calcium_bound_pkc",
"label": "Calcium bound PKC",
"maps_to": "signaling_sbml_ajay_bhalla_2007_pkm_model9147232940_model.calcium_bound_pkc",
"description": "Calcium bound PKC. Maps to SBML symbol `PKC_slash_PKC_minus_Ca` and is emitted in native SBML units."
},
{
"name": "membrane_active_calcium_bound_pkc",
"label": "Membrane active Calcium bound PKC",
"maps_to": "signaling_sbml_ajay_bhalla_2007_pkm_model9147232940_model.membrane_active_calcium_bound_pkc",
"description": "Membrane active Calcium bound PKC. Maps to SBML symbol `PKC_slash_PKC_minus_Ca_minus_memb_star_` and is emitted in native SBML units."
},
{
"name": "calcium_and_dag_bound_pkc",
"label": "Calcium And DAG bound PKC",
"maps_to": "signaling_sbml_ajay_bhalla_2007_pkm_model9147232940_model.calcium_and_dag_bound_pkc",
"description": "Calcium And DAG bound PKC. Maps to SBML symbol `PKC_slash_PKC_minus_Ca_minus_DAG` and is emitted in native SBML units."
},
{
"name": "state",
"label": "Observable state",
"maps_to": "signaling_sbml_ajay_bhalla_2007_pkm_model9147232940_model.state"
},
{
"name": "summary",
"label": "Simulation summary",
"maps_to": "signaling_sbml_ajay_bhalla_2007_pkm_model9147232940_model.summary"
},
{
"name": "species_labels",
"label": "Observable labels",
"maps_to": "signaling_sbml_ajay_bhalla_2007_pkm_model9147232940_model.species_labels"
}
]
},
"tags": [
"signaling",
"systems",
"systems-biology",
"sbml",
"faithful",
"biomodels_ebi",
"cellular-signaling"
],
"title": "Ajay_Bhalla_2007_PKM Lab",
"models": [
{
"path": "models/core",
"alias": "signaling_sbml_ajay_bhalla_2007_pkm_model9147232940_model"
},
{
"path": "models/visualisation",
"alias": "visualisation"
}
],
"wiring": [
{
"to": [
"visualisation.signaling_sbml_ajay_bhalla_2007_pkm_model9147232940_model_state"
],
"from": "signaling_sbml_ajay_bhalla_2007_pkm_model9147232940_model.state"
},
{
"to": [
"visualisation.signaling_sbml_ajay_bhalla_2007_pkm_model9147232940_model_summary"
],
"from": "signaling_sbml_ajay_bhalla_2007_pkm_model9147232940_model.summary"
},
{
"to": [
"visualisation.signaling_sbml_ajay_bhalla_2007_pkm_model9147232940_model_species_labels"
],
"from": "signaling_sbml_ajay_bhalla_2007_pkm_model9147232940_model.species_labels"
}
],
"package": "ajay-bhalla-2007-pkm",
"runtime": {
"duration": 1,
"initial_inputs": {},
"communication_step": 0.1
},
"version": "1.0.0",
"description": "Clean Biosimulant lab for systems signaling model: Ajay_Bhalla_2007_PKM. Values are native SBML quantities; equations, parameters, and initial values remain in the bundled source file.",
"schema_version": "2.0"
}Runtime
Duration1
Comms Step0.1
Runs
Total0
Completed0
Failed0
Metadata
Packageajay-bhalla-2007-pkm
Created2026-05-16
Updated2026-06-13
signalingsystemssystems-biologysbmlfaithfulbiomodels_ebicellular-signalingvisualisationother