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Paul François & Vincent Hakim. It can be used to explore systemsbiology fran ois2005 mixed feedback loop dynamics and compare simulation behavior across conditions.
Manifest
{
"io": {
"inputs": [
{
"name": "initial_model_state_g_b",
"label": "Initial Model State G B",
"maps_to": "systemsbiology_sbml_fran_ois2005_mixed_feedback_loop_two_gene_networ_biomd0000000539_model.initial_model_state_g_b",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `gB`."
},
{
"name": "initial_model_state_r_b",
"label": "Initial Model State R B",
"maps_to": "systemsbiology_sbml_fran_ois2005_mixed_feedback_loop_two_gene_networ_biomd0000000539_model.initial_model_state_r_b",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `rB`."
},
{
"name": "initial_ag_b",
"label": "Initial Ag B",
"maps_to": "systemsbiology_sbml_fran_ois2005_mixed_feedback_loop_two_gene_networ_biomd0000000539_model.initial_ag_b",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `AgB`."
},
{
"name": "initial_model_state_ab",
"label": "Initial Model State Ab",
"maps_to": "systemsbiology_sbml_fran_ois2005_mixed_feedback_loop_two_gene_networ_biomd0000000539_model.initial_model_state_ab",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `AB`."
},
{
"name": "initial_model_state_a",
"label": "Initial Model State A",
"maps_to": "systemsbiology_sbml_fran_ois2005_mixed_feedback_loop_two_gene_networ_biomd0000000539_model.initial_model_state_a",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `A`."
},
{
"name": "initial_model_state_b",
"label": "Initial Model State B",
"maps_to": "systemsbiology_sbml_fran_ois2005_mixed_feedback_loop_two_gene_networ_biomd0000000539_model.initial_model_state_b",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `B`."
}
],
"outputs": [
{
"name": "state",
"maps_to": "systemsbiology_sbml_fran_ois2005_mixed_feedback_loop_two_gene_networ_biomd0000000539_model.state"
},
{
"name": "summary",
"maps_to": "systemsbiology_sbml_fran_ois2005_mixed_feedback_loop_two_gene_networ_biomd0000000539_model.summary"
},
{
"name": "species_labels",
"maps_to": "systemsbiology_sbml_fran_ois2005_mixed_feedback_loop_two_gene_networ_biomd0000000539_model.species_labels"
},
{
"name": "g_b",
"maps_to": "systemsbiology_sbml_fran_ois2005_mixed_feedback_loop_two_gene_networ_biomd0000000539_model.g_b"
},
{
"name": "r_b",
"maps_to": "systemsbiology_sbml_fran_ois2005_mixed_feedback_loop_two_gene_networ_biomd0000000539_model.r_b"
},
{
"name": "ag_b",
"maps_to": "systemsbiology_sbml_fran_ois2005_mixed_feedback_loop_two_gene_networ_biomd0000000539_model.ag_b"
},
{
"name": "model_state_ab",
"maps_to": "systemsbiology_sbml_fran_ois2005_mixed_feedback_loop_two_gene_networ_biomd0000000539_model.model_state_ab"
},
{
"name": "model_state_a",
"maps_to": "systemsbiology_sbml_fran_ois2005_mixed_feedback_loop_two_gene_networ_biomd0000000539_model.model_state_a"
},
{
"name": "model_state_b",
"maps_to": "systemsbiology_sbml_fran_ois2005_mixed_feedback_loop_two_gene_networ_biomd0000000539_model.model_state_b"
}
]
},
"tags": [
"generegulation",
"systemsbiology",
"sbml",
"biomodels_ebi",
"faithful",
"curated"
],
"title": "Francois2005 Mixed Feedback Loop Lab",
"models": [
{
"path": "models/core",
"alias": "systemsbiology_sbml_fran_ois2005_mixed_feedback_loop_two_gene_networ_biomd0000000539_model"
},
{
"path": "models/visualisation",
"alias": "visualisation"
}
],
"wiring": [
{
"to": [
"visualisation.systemsbiology_sbml_fran_ois2005_mixed_feedback_loop_two_gene_networ_biomd0000000539_model_state"
],
"from": "systemsbiology_sbml_fran_ois2005_mixed_feedback_loop_two_gene_networ_biomd0000000539_model.state"
},
{
"to": [
"visualisation.systemsbiology_sbml_fran_ois2005_mixed_feedback_loop_two_gene_networ_biomd0000000539_model_summary"
],
"from": "systemsbiology_sbml_fran_ois2005_mixed_feedback_loop_two_gene_networ_biomd0000000539_model.summary"
},
{
"to": [
"visualisation.systemsbiology_sbml_fran_ois2005_mixed_feedback_loop_two_gene_networ_biomd0000000539_model_species_labels"
],
"from": "systemsbiology_sbml_fran_ois2005_mixed_feedback_loop_two_gene_networ_biomd0000000539_model.species_labels"
}
],
"package": "francois2005-mixed-feedback-loop",
"runtime": {
"duration": 1,
"initial_inputs": {},
"communication_step": 0.1
},
"version": "1.0.0",
"description": "Paul François & Vincent Hakim. It can be used to explore systemsbiology fran ois2005 mixed feedback loop dynamics and compare simulation behavior across conditions.",
"schema_version": "2.0"
}Runtime
Duration1
Comms Step0.1
Runs
Total0
Completed0
Failed0
Metadata
Packagefrancois2005-mixed-feedback-loop
Created2026-05-17
Updated2026-06-13
generegulationsystemsbiologysbmlbiomodels_ebifaithfulcuratedvisualisationother