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Single-model lab wrapper for Garira2019 - A coupled multiscale model to guide malaria control and elimination. This is a coupled multiscale mathematical model of malaria control and elimination containing four submodels: mosquito-to-human transmission of the malaria parasite, human-to-mosquito transmission of. It can be used to explore transmission dynamics and compare scenario outcomes across conditions.
Manifest
{
"io": {
"inputs": [
{
"name": "mosquito_to_human_transmission",
"label": "Mosquito To Human Transmission",
"maps_to": "epidemiology_sbml_garira2019_a_coupled_multiscale_model_to_guide_m_model2003190008_model.mosquito_to_human_transmission"
},
{
"name": "human_to_mosquito_transmission",
"label": "Human To Mosquito Transmission",
"maps_to": "epidemiology_sbml_garira2019_a_coupled_multiscale_model_to_guide_m_model2003190008_model.human_to_mosquito_transmission"
},
{
"name": "human_recovery_rate",
"label": "Human Recovery Rate",
"maps_to": "epidemiology_sbml_garira2019_a_coupled_multiscale_model_to_guide_m_model2003190008_model.human_recovery_rate"
},
{
"name": "mosquito_mortality_rate",
"label": "Mosquito Mortality Rate",
"maps_to": "epidemiology_sbml_garira2019_a_coupled_multiscale_model_to_guide_m_model2003190008_model.mosquito_mortality_rate"
},
{
"name": "gametocyte_production_rate",
"label": "Gametocyte Production Rate",
"maps_to": "epidemiology_sbml_garira2019_a_coupled_multiscale_model_to_guide_m_model2003190008_model.gametocyte_production_rate"
}
],
"outputs": [
{
"name": "state",
"label": "Model state",
"maps_to": "epidemiology_sbml_garira2019_a_coupled_multiscale_model_to_guide_m_model2003190008_model.state"
},
{
"name": "summary",
"label": "Simulation summary",
"maps_to": "epidemiology_sbml_garira2019_a_coupled_multiscale_model_to_guide_m_model2003190008_model.summary"
},
{
"name": "species_labels",
"label": "Species labels",
"maps_to": "epidemiology_sbml_garira2019_a_coupled_multiscale_model_to_guide_m_model2003190008_model.species_labels"
},
{
"name": "susceptible_humans",
"label": "Susceptible humans",
"maps_to": "epidemiology_sbml_garira2019_a_coupled_multiscale_model_to_guide_m_model2003190008_model.susceptible_humans"
},
{
"name": "infected_humans",
"label": "Infected humans",
"maps_to": "epidemiology_sbml_garira2019_a_coupled_multiscale_model_to_guide_m_model2003190008_model.infected_humans"
},
{
"name": "vector_parasite_load",
"label": "Vector parasite load",
"maps_to": "epidemiology_sbml_garira2019_a_coupled_multiscale_model_to_guide_m_model2003190008_model.vector_parasite_load"
},
{
"name": "susceptible_vectors",
"label": "Susceptible vectors",
"maps_to": "epidemiology_sbml_garira2019_a_coupled_multiscale_model_to_guide_m_model2003190008_model.susceptible_vectors"
},
{
"name": "infected_vectors",
"label": "Infected vectors",
"maps_to": "epidemiology_sbml_garira2019_a_coupled_multiscale_model_to_guide_m_model2003190008_model.infected_vectors"
},
{
"name": "human_gametocyte_load",
"label": "Human gametocyte load",
"maps_to": "epidemiology_sbml_garira2019_a_coupled_multiscale_model_to_guide_m_model2003190008_model.human_gametocyte_load"
}
]
},
"title": "Garira2019 - A coupled multiscale model to guide malaria control and elimination Lab",
"models": [
{
"path": "models/core",
"alias": "epidemiology_sbml_garira2019_a_coupled_multiscale_model_to_guide_m_model2003190008_model",
"parameters": {
"model_path": "data/MODEL2003190008.xml",
"integration_step": 0.1
}
},
{
"path": "models/visualisation",
"alias": "visualisation"
}
],
"wiring": [
{
"to": [
"visualisation.epidemiology_sbml_garira2019_a_coupled_multiscale_model_to_guide_m_model2003190008_model_state"
],
"from": "epidemiology_sbml_garira2019_a_coupled_multiscale_model_to_guide_m_model2003190008_model.state"
},
{
"to": [
"visualisation.epidemiology_sbml_garira2019_a_coupled_multiscale_model_to_guide_m_model2003190008_model_summary"
],
"from": "epidemiology_sbml_garira2019_a_coupled_multiscale_model_to_guide_m_model2003190008_model.summary"
},
{
"to": [
"visualisation.epidemiology_sbml_garira2019_a_coupled_multiscale_model_to_guide_m_model2003190008_model_species_labels"
],
"from": "epidemiology_sbml_garira2019_a_coupled_multiscale_model_to_guide_m_model2003190008_model.species_labels"
}
],
"package": "garira2019-malaria-multiscale-control",
"runtime": {
"duration": 10,
"initial_inputs": {},
"communication_step": 0.1
},
"version": "1.0.0",
"description": "Single-model lab wrapper for Garira2019 - A coupled multiscale model to guide malaria control and elimination. This is a coupled multiscale mathematical model of malaria control and elimination containing four submodels: mosquito-to-human transmission of the malaria parasite, human-to-mosquito transmission of. It can be used to explore transmission dynamics and compare scenario outcomes across conditions.",
"schema_version": "2.0"
}Runtime
Duration10
Comms Step0.1
Runs
Total0
Completed0
Failed0
Metadata
Packagegarira2019-malaria-multiscale-control
Created2026-05-15
Updated2026-06-13
biomodels_ebicuratedepidemiologyfaithfulsbmltelluriumvisualisationother