Miao2014 - Dynamics and migratory pathways of virus-specific antibody-secreting cell populations Lab
About lab
One published Lab
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Use the same immutable release locally or through managed cloud execution, with its exact version and provenance preserved.
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This model is from the paper available at http://www.ncbi.nlm.nih.gov/pubmed/25171166. The original model contains time-varying parameters which are describedby a smoothing spline.
Manifest
{
"io": {
"inputs": [
{
"name": "initial_cell_spleen",
"label": "Initial Cell Spleen",
"units": "native source value",
"default": 3400,
"maps_to": "immunology_sbml_miao2014_dynamics_and_migratory_pathways_of_viru_model1411130000_model.initial_cell_spleen",
"description": "Initial Cell Spleen. Sets the initial value of bundled SBML species `s1`."
},
{
"name": "initial_cell_mln",
"label": "Initial Cell Mln",
"units": "native source value",
"default": 1100,
"maps_to": "immunology_sbml_miao2014_dynamics_and_migratory_pathways_of_viru_model1411130000_model.initial_cell_mln",
"description": "Initial Cell Mln. Sets the initial value of bundled SBML species `s2`."
},
{
"name": "initial_cell_lung",
"label": "Initial Cell Lung",
"units": "native source value",
"default": 18,
"maps_to": "immunology_sbml_miao2014_dynamics_and_migratory_pathways_of_viru_model1411130000_model.initial_cell_lung",
"description": "Initial Cell Lung. Sets the initial value of bundled SBML species `s3`."
},
{
"name": "initial_unresolved_infection_observable_1",
"label": "Initial Unresolved Infection Observable 1",
"units": "native source value",
"default": 0,
"maps_to": "immunology_sbml_miao2014_dynamics_and_migratory_pathways_of_viru_model1411130000_model.initial_unresolved_infection_observable_1",
"description": "Initial Unresolved Infection Observable 1. Sets the initial value of bundled SBML species `s4`."
},
{
"name": "initial_unresolved_infection_observable_2",
"label": "Initial Unresolved Infection Observable 2",
"units": "native source value",
"default": 0,
"maps_to": "immunology_sbml_miao2014_dynamics_and_migratory_pathways_of_viru_model1411130000_model.initial_unresolved_infection_observable_2",
"description": "Initial Unresolved Infection Observable 2. Sets the initial value of bundled SBML species `s5`."
}
],
"outputs": [
{
"name": "cell_spleen",
"maps_to": "immunology_sbml_miao2014_dynamics_and_migratory_pathways_of_viru_model1411130000_model.cell_spleen"
},
{
"name": "cell_mln",
"maps_to": "immunology_sbml_miao2014_dynamics_and_migratory_pathways_of_viru_model1411130000_model.cell_mln"
},
{
"name": "cell_lung",
"maps_to": "immunology_sbml_miao2014_dynamics_and_migratory_pathways_of_viru_model1411130000_model.cell_lung"
},
{
"name": "unresolved_infection_observable_1",
"maps_to": "immunology_sbml_miao2014_dynamics_and_migratory_pathways_of_viru_model1411130000_model.unresolved_infection_observable_1"
},
{
"name": "unresolved_infection_observable_2",
"maps_to": "immunology_sbml_miao2014_dynamics_and_migratory_pathways_of_viru_model1411130000_model.unresolved_infection_observable_2"
},
{
"name": "state",
"maps_to": "immunology_sbml_miao2014_dynamics_and_migratory_pathways_of_viru_model1411130000_model.state"
},
{
"name": "summary",
"maps_to": "immunology_sbml_miao2014_dynamics_and_migratory_pathways_of_viru_model1411130000_model.summary"
},
{
"name": "species_labels",
"maps_to": "immunology_sbml_miao2014_dynamics_and_migratory_pathways_of_viru_model1411130000_model.species_labels"
}
]
},
"title": "Miao2014 - Dynamics and migratory pathways of virus-specific antibody-secreting cell populations Lab",
"models": [
{
"path": "models/core",
"alias": "immunology_sbml_miao2014_dynamics_and_migratory_pathways_of_viru_model1411130000_model"
},
{
"path": "models/visualisation",
"alias": "visualisation"
}
],
"wiring": [
{
"to": [
"visualisation.immunology_sbml_miao2014_dynamics_and_migratory_pathways_of_viru_model1411130000_model_state"
],
"from": "immunology_sbml_miao2014_dynamics_and_migratory_pathways_of_viru_model1411130000_model.state"
},
{
"to": [
"visualisation.immunology_sbml_miao2014_dynamics_and_migratory_pathways_of_viru_model1411130000_model_summary"
],
"from": "immunology_sbml_miao2014_dynamics_and_migratory_pathways_of_viru_model1411130000_model.summary"
},
{
"to": [
"visualisation.immunology_sbml_miao2014_dynamics_and_migratory_pathways_of_viru_model1411130000_model_species_labels"
],
"from": "immunology_sbml_miao2014_dynamics_and_migratory_pathways_of_viru_model1411130000_model.species_labels"
}
],
"package": "miao2014-dynamics-and-migratory-pathways-of-virus-specific",
"runtime": {
"duration": 10,
"initial_inputs": {},
"communication_step": 1
},
"version": "1.0.0",
"description": "This model is from the paper available at http://www.ncbi.nlm.nih.gov/pubmed/25171166. The original model contains time-varying parameters which are describedby a smoothing spline.",
"schema_version": "2.0"
}Runtime
Duration10
Comms Step1
Runs
Total0
Completed0
Failed0
Metadata
Packagemiao2014-dynamics-and-migratory-pathways-of-virus-specific
Created2026-05-15
Updated2026-06-13
immunologysbmlbiomodels_ebifaithfulcuratedvisualisationother