Raposo2002 - Minimal Mathematical Calcium Homeostasis Lab

{
  "io": {
    "inputs": [
      {
        "name": "initial_exchangeable_pool_of_phosphate_in_the_bone",
        "label": "Initial Exchangeable Pool Of Phosphate In The Bone",
        "maps_to": "physiology_cellml_raposo_sobrinho_and_ferreira_2002_rapososobrinhoferreira2002_model.initial_exchangeable_pool_of_phosphate_in_the_bone",
        "description": "Initial value for Exchangeable Pool Of Phosphate In The Bone. Maps to source symbol `Q_P_b`. Units: millimole. Naming evidence: source metadata names `Q_P_b` as `exchangeable pool of phosphate in the bone`.",
        "accepted_units": [
          "millimole"
        ]
      },
      {
        "name": "initial_intracellular_phosphate",
        "label": "Initial Intracellular Phosphate",
        "maps_to": "physiology_cellml_raposo_sobrinho_and_ferreira_2002_rapososobrinhoferreira2002_model.initial_intracellular_phosphate",
        "description": "Initial value for Intracellular Phosphate. Maps to source symbol `Q_P_c`. Units: millimole. Naming evidence: source metadata names `Q_P_c` as `intracellular phosphate`.",
        "accepted_units": [
          "millimole"
        ]
      }
    ],
    "outputs": [
      {
        "name": "state",
        "label": "Selected Source State",
        "maps_to": "physiology_cellml_raposo_sobrinho_and_ferreira_2002_rapososobrinhoferreira2002_model.state"
      },
      {
        "name": "summary",
        "label": "Simulation Summary",
        "maps_to": "physiology_cellml_raposo_sobrinho_and_ferreira_2002_rapososobrinhoferreira2002_model.summary"
      },
      {
        "name": "trajectory",
        "label": "Source Trajectory",
        "maps_to": "physiology_cellml_raposo_sobrinho_and_ferreira_2002_rapososobrinhoferreira2002_model.trajectory"
      },
      {
        "name": "variable_labels",
        "label": "Observable Labels",
        "maps_to": "physiology_cellml_raposo_sobrinho_and_ferreira_2002_rapososobrinhoferreira2002_model.variable_labels"
      },
      {
        "name": "pth_pool",
        "label": "Pth Pool",
        "maps_to": "physiology_cellml_raposo_sobrinho_and_ferreira_2002_rapososobrinhoferreira2002_model.pth_pool",
        "description": "Pth Pool. Maps to source symbol `Q_PTH_p`. Units: millimole. Naming evidence: source metadata names `Q_PTH_p` as `PTH pool`."
      },
      {
        "name": "b_e_pth",
        "label": "B E Pth",
        "maps_to": "physiology_cellml_raposo_sobrinho_and_ferreira_2002_rapososobrinhoferreira2002_model.b_e_pth",
        "description": "B E Pth. Maps to source symbol `b_E_PTH`. Units: litre_per_picomole. Naming evidence: source symbol, component, or units provide a direct public name."
      },
      {
        "name": "b_pth_ca",
        "label": "B Pth Ca",
        "maps_to": "physiology_cellml_raposo_sobrinho_and_ferreira_2002_rapososobrinhoferreira2002_model.b_pth_ca",
        "description": "B Pth Ca. Maps to source symbol `b_PTH_Ca`. Units: litre_per_millimole. Naming evidence: source symbol, component, or units provide a direct public name."
      },
      {
        "name": "b_pth_d",
        "label": "B Pth D",
        "maps_to": "physiology_cellml_raposo_sobrinho_and_ferreira_2002_rapososobrinhoferreira2002_model.b_pth_d",
        "description": "B Pth D. Maps to source symbol `b_PTH_D`. Units: litre_per_picomole. Naming evidence: source symbol, component, or units provide a direct public name."
      },
      {
        "name": "c_pth_p_concentration",
        "label": "C Pth P Concentration",
        "maps_to": "physiology_cellml_raposo_sobrinho_and_ferreira_2002_rapososobrinhoferreira2002_model.c_pth_p_concentration",
        "description": "C Pth P Concentration. Maps to source symbol `C_PTH_p`. Units: millimolar. Naming evidence: source symbol, component, or units provide a direct public name."
      },
      {
        "name": "x_r_e_pth",
        "label": "X R E Pth",
        "maps_to": "physiology_cellml_raposo_sobrinho_and_ferreira_2002_rapososobrinhoferreira2002_model.x_r_e_pth",
        "description": "X R E Pth. Maps to source symbol `X_R_E_PTH`. Units: picomolar. Naming evidence: source symbol, component, or units provide a direct public name."
      }
    ]
  },
  "title": "Raposo2002 - Minimal Mathematical Calcium Homeostasis Lab",
  "models": [
    {
      "path": "models/core",
      "alias": "physiology_cellml_raposo_sobrinho_and_ferreira_2002_rapososobrinhoferreira2002_model",
      "parameters": {
        "model_path": "data/raposo_2002.cellml",
        "integration_step": 0.01
      }
    },
    {
      "path": "models/visualisation",
      "alias": "visualisation"
    }
  ],
  "wiring": [
    {
      "to": [
        "visualisation.physiology_cellml_raposo_sobrinho_and_ferreira_2002_rapososobrinhoferreira2002_model_state"
      ],
      "from": "physiology_cellml_raposo_sobrinho_and_ferreira_2002_rapososobrinhoferreira2002_model.state"
    },
    {
      "to": [
        "visualisation.physiology_cellml_raposo_sobrinho_and_ferreira_2002_rapososobrinhoferreira2002_model_summary"
      ],
      "from": "physiology_cellml_raposo_sobrinho_and_ferreira_2002_rapososobrinhoferreira2002_model.summary"
    },
    {
      "to": [
        "visualisation.physiology_cellml_raposo_sobrinho_and_ferreira_2002_rapososobrinhoferreira2002_model_trajectory"
      ],
      "from": "physiology_cellml_raposo_sobrinho_and_ferreira_2002_rapososobrinhoferreira2002_model.trajectory"
    },
    {
      "to": [
        "visualisation.physiology_cellml_raposo_sobrinho_and_ferreira_2002_rapososobrinhoferreira2002_model_variable_labels"
      ],
      "from": "physiology_cellml_raposo_sobrinho_and_ferreira_2002_rapososobrinhoferreira2002_model.variable_labels"
    }
  ],
  "package": "raposo2002-minimal-mathematical-calcium-homeostasis",
  "runtime": {
    "duration": 0.01,
    "settle_steps": 1,
    "initial_inputs": {},
    "communication_step": 0.01
  },
  "version": "1.0.0",
  "description": "Source-faithful physiology lab for Raposo, Sobrinho and Ferreira, 2002. Public controls and outputs are mapped to real source symbols for calcium handling.",
  "schema_version": "2.0"
}