Fribourg2014 - Dynamics of viral antagonism and innate immune response (H1N1 influenza A virus - Cal/09) Lab
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Fribourg2014 - Dynamics of viral antagonism and innate immune response (H1N1 influenza A virus - Cal/09) The dynamics of the interplay between the viral antagonism and the innate immune response has b. It can be used to explore immune response dynamics and compare pathway-level behavior across conditions.
Manifest
{
"io": {
"inputs": [
{
"name": "initial_interferon_beta_mrna",
"label": "Initial Interferon Beta mRNA",
"units": "native source value",
"default": 0,
"maps_to": "immunology_sbml_fribourg2014_dynamics_of_viral_antagonism_and_in_biomd0000000528_model.initial_interferon_beta_mrna",
"description": "Initial Interferon Beta mRNA. Sets the initial value of bundled SBML species `IFNb_mRNA`."
},
{
"name": "initial_interferon_beta_env",
"label": "Initial Interferon Beta Env",
"units": "native source value",
"default": 0,
"maps_to": "immunology_sbml_fribourg2014_dynamics_of_viral_antagonism_and_in_biomd0000000528_model.initial_interferon_beta_env",
"description": "Initial Interferon Beta Env. Sets the initial value of bundled SBML species `IFNb_env`."
},
{
"name": "initial_interferon_alpha_mrna",
"label": "Initial Interferon Alpha mRNA",
"units": "native source value",
"default": 0,
"maps_to": "immunology_sbml_fribourg2014_dynamics_of_viral_antagonism_and_in_biomd0000000528_model.initial_interferon_alpha_mrna",
"description": "Initial Interferon Alpha mRNA. Sets the initial value of bundled SBML species `IFNa_mRNA`."
},
{
"name": "initial_interferon_alpha_env",
"label": "Initial Interferon Alpha Env",
"units": "native source value",
"default": 0,
"maps_to": "immunology_sbml_fribourg2014_dynamics_of_viral_antagonism_and_in_biomd0000000528_model.initial_interferon_alpha_env",
"description": "Initial Interferon Alpha Env. Sets the initial value of bundled SBML species `IFNa_env`."
}
],
"outputs": [
{
"name": "interferon_beta_mrna",
"maps_to": "immunology_sbml_fribourg2014_dynamics_of_viral_antagonism_and_in_biomd0000000528_model.interferon_beta_mrna"
},
{
"name": "interferon_beta_env",
"maps_to": "immunology_sbml_fribourg2014_dynamics_of_viral_antagonism_and_in_biomd0000000528_model.interferon_beta_env"
},
{
"name": "interferon_alpha_mrna",
"maps_to": "immunology_sbml_fribourg2014_dynamics_of_viral_antagonism_and_in_biomd0000000528_model.interferon_alpha_mrna"
},
{
"name": "interferon_alpha_env",
"maps_to": "immunology_sbml_fribourg2014_dynamics_of_viral_antagonism_and_in_biomd0000000528_model.interferon_alpha_env"
},
{
"name": "unresolved_infection_observable_1",
"maps_to": "immunology_sbml_fribourg2014_dynamics_of_viral_antagonism_and_in_biomd0000000528_model.unresolved_infection_observable_1"
},
{
"name": "state",
"maps_to": "immunology_sbml_fribourg2014_dynamics_of_viral_antagonism_and_in_biomd0000000528_model.state"
},
{
"name": "summary",
"maps_to": "immunology_sbml_fribourg2014_dynamics_of_viral_antagonism_and_in_biomd0000000528_model.summary"
},
{
"name": "species_labels",
"maps_to": "immunology_sbml_fribourg2014_dynamics_of_viral_antagonism_and_in_biomd0000000528_model.species_labels"
}
]
},
"title": "Fribourg2014 - Dynamics of viral antagonism and innate immune response (H1N1 influenza A virus - Cal/09) Lab",
"models": [
{
"path": "models/core",
"alias": "immunology_sbml_fribourg2014_dynamics_of_viral_antagonism_and_in_biomd0000000528_model"
},
{
"path": "models/visualisation",
"alias": "visualisation"
}
],
"wiring": [
{
"to": [
"visualisation.immunology_sbml_fribourg2014_dynamics_of_viral_antagonism_and_in_biomd0000000528_model_state"
],
"from": "immunology_sbml_fribourg2014_dynamics_of_viral_antagonism_and_in_biomd0000000528_model.state"
},
{
"to": [
"visualisation.immunology_sbml_fribourg2014_dynamics_of_viral_antagonism_and_in_biomd0000000528_model_summary"
],
"from": "immunology_sbml_fribourg2014_dynamics_of_viral_antagonism_and_in_biomd0000000528_model.summary"
},
{
"to": [
"visualisation.immunology_sbml_fribourg2014_dynamics_of_viral_antagonism_and_in_biomd0000000528_model_species_labels"
],
"from": "immunology_sbml_fribourg2014_dynamics_of_viral_antagonism_and_in_biomd0000000528_model.species_labels"
}
],
"package": "fribourg2014-dynamics-of-viral-antagonism-and-innate-immune",
"runtime": {
"duration": 10,
"initial_inputs": {},
"communication_step": 1
},
"version": "1.0.0",
"description": "Fribourg2014 - Dynamics of viral antagonism and innate immune response (H1N1 influenza A virus - Cal/09) The dynamics of the interplay between the viral antagonism and the innate immune response has b. It can be used to explore immune response dynamics and compare pathway-level behavior across conditions.",
"schema_version": "2.0"
}Runtime
Duration10
Comms Step1
Runs
Total0
Completed0
Failed0
Metadata
Packagefribourg2014-dynamics-of-viral-antagonism-and-innate-immune
Created2026-06-13
Updated2026-06-13
immunologysbmlbiomodels_ebifaithfulcuratedvisualisationother