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Clean Biosimulant lab for systems signaling model: Hetmanski2021 rear retraction kinetic. Values are native SBML quantities; equations, parameters, and initial values remain in the bundled source file.
Manifest
{
"io": {
"inputs": [
{
"name": "initial_rho_agdp",
"label": "Initial Rho Agdp",
"maps_to": "signaling_sbml_hetmanski2021_rear_retraction_kinetic_model2103010001_model.initial_rho_agdp",
"description": "Initial level of Rho Agdp. Maps to SBML symbol `RhoAgdp`; exposed as a traceable initial-condition perturbation."
}
],
"outputs": [
{
"name": "actinf",
"label": "Actinf",
"maps_to": "signaling_sbml_hetmanski2021_rear_retraction_kinetic_model2103010001_model.actinf",
"description": "Actinf. Maps to SBML symbol `Actinf` and is emitted in native SBML units."
},
{
"name": "p_mlca",
"label": "P Mlca",
"maps_to": "signaling_sbml_hetmanski2021_rear_retraction_kinetic_model2103010001_model.p_mlca",
"description": "P Mlca. Maps to SBML symbol `pMLCa` and is emitted in native SBML units."
},
{
"name": "cavi_src",
"label": "Cavi Src",
"maps_to": "signaling_sbml_hetmanski2021_rear_retraction_kinetic_model2103010001_model.cavi_src",
"description": "Cavi Src. Maps to SBML symbol `Cavi_Src` and is emitted in native SBML units."
},
{
"name": "state",
"label": "Observable state",
"maps_to": "signaling_sbml_hetmanski2021_rear_retraction_kinetic_model2103010001_model.state"
},
{
"name": "summary",
"label": "Simulation summary",
"maps_to": "signaling_sbml_hetmanski2021_rear_retraction_kinetic_model2103010001_model.summary"
},
{
"name": "species_labels",
"label": "Observable labels",
"maps_to": "signaling_sbml_hetmanski2021_rear_retraction_kinetic_model2103010001_model.species_labels"
}
]
},
"tags": [
"signaling",
"systems",
"systems-biology",
"sbml",
"faithful",
"biomodels_ebi",
"gpcr"
],
"title": "Hetmanski2021 rear retraction kinetic Lab",
"models": [
{
"path": "models/core",
"alias": "signaling_sbml_hetmanski2021_rear_retraction_kinetic_model2103010001_model"
},
{
"path": "models/visualisation",
"alias": "visualisation"
}
],
"wiring": [
{
"to": [
"visualisation.signaling_sbml_hetmanski2021_rear_retraction_kinetic_model2103010001_model_state"
],
"from": "signaling_sbml_hetmanski2021_rear_retraction_kinetic_model2103010001_model.state"
},
{
"to": [
"visualisation.signaling_sbml_hetmanski2021_rear_retraction_kinetic_model2103010001_model_summary"
],
"from": "signaling_sbml_hetmanski2021_rear_retraction_kinetic_model2103010001_model.summary"
},
{
"to": [
"visualisation.signaling_sbml_hetmanski2021_rear_retraction_kinetic_model2103010001_model_species_labels"
],
"from": "signaling_sbml_hetmanski2021_rear_retraction_kinetic_model2103010001_model.species_labels"
}
],
"package": "hetmanski2021-rear-retraction-kinetic",
"runtime": {
"duration": 1,
"initial_inputs": {},
"communication_step": 0.1
},
"version": "1.0.0",
"description": "Clean Biosimulant lab for systems signaling model: Hetmanski2021 rear retraction kinetic. Values are native SBML quantities; equations, parameters, and initial values remain in the bundled source file.",
"schema_version": "2.0"
}Runtime
Duration1
Comms Step0.1
Runs
Total0
Completed0
Failed0
Metadata
Packagehetmanski2021-rear-retraction-kinetic
Created2026-05-16
Updated2026-06-13
signalingsystemssystems-biologysbmlfaithfulbiomodels_ebigpcrvisualisationother