Yildirim2003 Lac Operon Lab

{
  "io": {
    "inputs": [
      {
        "name": "external_lactose",
        "label": "External lactose",
        "maps_to": "yildirim2003_lac_operon.external_lactose",
        "description": "Boundary species `L_e` (`External_Lactose`), the source extracellular lactose level."
      }
    ],
    "outputs": [
      {
        "name": "lac_messenger_rna",
        "maps_to": "yildirim2003_lac_operon.lac_messenger_rna"
      },
      {
        "name": "beta_galactosidase",
        "maps_to": "yildirim2003_lac_operon.beta_galactosidase"
      },
      {
        "name": "allolactose",
        "maps_to": "yildirim2003_lac_operon.allolactose"
      },
      {
        "name": "permease",
        "maps_to": "yildirim2003_lac_operon.permease"
      },
      {
        "name": "state",
        "maps_to": "yildirim2003_lac_operon.state"
      },
      {
        "name": "summary",
        "maps_to": "yildirim2003_lac_operon.summary"
      },
      {
        "name": "species_labels",
        "maps_to": "yildirim2003_lac_operon.species_labels"
      }
    ]
  },
  "title": "Yildirim2003 Lac Operon Lab",
  "models": [
    {
      "path": "models/core",
      "alias": "yildirim2003_lac_operon",
      "parameters": {
        "model_path": "data/BIOMD0000000065.xml",
        "integration_step": 0.1
      }
    },
    {
      "path": "models/visualisation",
      "alias": "visualisation"
    }
  ],
  "wiring": [
    {
      "to": [
        "visualisation.yildirim2003_lac_operon_lac_messenger_rna"
      ],
      "from": "yildirim2003_lac_operon.lac_messenger_rna"
    },
    {
      "to": [
        "visualisation.yildirim2003_lac_operon_beta_galactosidase"
      ],
      "from": "yildirim2003_lac_operon.beta_galactosidase"
    },
    {
      "to": [
        "visualisation.yildirim2003_lac_operon_allolactose"
      ],
      "from": "yildirim2003_lac_operon.allolactose"
    },
    {
      "to": [
        "visualisation.yildirim2003_lac_operon_permease"
      ],
      "from": "yildirim2003_lac_operon.permease"
    },
    {
      "to": [
        "visualisation.yildirim2003_lac_operon_state"
      ],
      "from": "yildirim2003_lac_operon.state"
    },
    {
      "to": [
        "visualisation.yildirim2003_lac_operon_summary"
      ],
      "from": "yildirim2003_lac_operon.summary"
    },
    {
      "to": [
        "visualisation.yildirim2003_lac_operon_species_labels"
      ],
      "from": "yildirim2003_lac_operon.species_labels"
    }
  ],
  "package": "yildirim2003-lac-operon",
  "runtime": {
    "duration": 10,
    "initial_inputs": {},
    "communication_step": 1
  },
  "version": "1.0.1",
  "description": "lac operon feedback. This a model from the article: Feedback regulation in the lactose operon: a mathematical modeling study and comparison with experimental data. It can be used to explore generegulation yildirim2003 lac operon BioModels0000000065 dynamics and compare simulation behavior across conditions.",
  "schema_version": "2.0"
}