Kilian2024 - Immune cell dynamics in Cue-Induced Extended Human Colitis Model Lab

{
  "io": {
    "inputs": [
      {
        "name": "initial_cell",
        "label": "Initial Cell",
        "units": "native source value",
        "default": 0.0468867574754616,
        "maps_to": "immunology_sbml_kilian2024_immune_cell_dynamics_in_cue_induced_e_model2502180001_model.initial_cell",
        "description": "Initial Cell. Sets the initial value of bundled SBML species `Bcell`."
      },
      {
        "name": "initial_unresolved_immune_observable_1",
        "label": "Initial Unresolved Immune Observable 1",
        "units": "native source value",
        "default": 0.0215256076306623,
        "maps_to": "immunology_sbml_kilian2024_immune_cell_dynamics_in_cue_induced_e_model2502180001_model.initial_unresolved_immune_observable_1",
        "description": "Initial Unresolved Immune Observable 1. Sets the initial value of bundled SBML species `Tcell`."
      },
      {
        "name": "initial_unresolved_immune_observable_2",
        "label": "Initial Unresolved Immune Observable 2",
        "units": "native source value",
        "default": 0.0608414487144472,
        "maps_to": "immunology_sbml_kilian2024_immune_cell_dynamics_in_cue_induced_e_model2502180001_model.initial_unresolved_immune_observable_2",
        "description": "Initial Unresolved Immune Observable 2. Sets the initial value of bundled SBML species `Mac`."
      },
      {
        "name": "initial_neutr",
        "label": "Initial Neutr",
        "units": "native source value",
        "default": 0.0481656099063014,
        "maps_to": "immunology_sbml_kilian2024_immune_cell_dynamics_in_cue_induced_e_model2502180001_model.initial_neutr",
        "description": "Initial Neutr. Sets the initial value of bundled SBML species `Neutr`."
      },
      {
        "name": "initial_unresolved_immune_observable_3",
        "label": "Initial Unresolved Immune Observable 3",
        "units": "native source value",
        "default": 0.300977731108012,
        "maps_to": "immunology_sbml_kilian2024_immune_cell_dynamics_in_cue_induced_e_model2502180001_model.initial_unresolved_immune_observable_3",
        "description": "Initial Unresolved Immune Observable 3. Sets the initial value of bundled SBML species `Epi`."
      }
    ],
    "outputs": [
      {
        "name": "cell",
        "maps_to": "immunology_sbml_kilian2024_immune_cell_dynamics_in_cue_induced_e_model2502180001_model.cell"
      },
      {
        "name": "unresolved_immune_observable_1",
        "maps_to": "immunology_sbml_kilian2024_immune_cell_dynamics_in_cue_induced_e_model2502180001_model.unresolved_immune_observable_1"
      },
      {
        "name": "unresolved_immune_observable_2",
        "maps_to": "immunology_sbml_kilian2024_immune_cell_dynamics_in_cue_induced_e_model2502180001_model.unresolved_immune_observable_2"
      },
      {
        "name": "neutr",
        "maps_to": "immunology_sbml_kilian2024_immune_cell_dynamics_in_cue_induced_e_model2502180001_model.neutr"
      },
      {
        "name": "unresolved_immune_observable_3",
        "maps_to": "immunology_sbml_kilian2024_immune_cell_dynamics_in_cue_induced_e_model2502180001_model.unresolved_immune_observable_3"
      },
      {
        "name": "state",
        "maps_to": "immunology_sbml_kilian2024_immune_cell_dynamics_in_cue_induced_e_model2502180001_model.state"
      },
      {
        "name": "summary",
        "maps_to": "immunology_sbml_kilian2024_immune_cell_dynamics_in_cue_induced_e_model2502180001_model.summary"
      },
      {
        "name": "species_labels",
        "maps_to": "immunology_sbml_kilian2024_immune_cell_dynamics_in_cue_induced_e_model2502180001_model.species_labels"
      }
    ]
  },
  "title": "Kilian2024 - Immune cell dynamics in Cue-Induced Extended Human Colitis Model Lab",
  "models": [
    {
      "path": "models/core",
      "alias": "immunology_sbml_kilian2024_immune_cell_dynamics_in_cue_induced_e_model2502180001_model"
    },
    {
      "path": "models/visualisation",
      "alias": "visualisation"
    }
  ],
  "wiring": [
    {
      "to": [
        "visualisation.immunology_sbml_kilian2024_immune_cell_dynamics_in_cue_induced_e_model2502180001_model_state"
      ],
      "from": "immunology_sbml_kilian2024_immune_cell_dynamics_in_cue_induced_e_model2502180001_model.state"
    },
    {
      "to": [
        "visualisation.immunology_sbml_kilian2024_immune_cell_dynamics_in_cue_induced_e_model2502180001_model_summary"
      ],
      "from": "immunology_sbml_kilian2024_immune_cell_dynamics_in_cue_induced_e_model2502180001_model.summary"
    },
    {
      "to": [
        "visualisation.immunology_sbml_kilian2024_immune_cell_dynamics_in_cue_induced_e_model2502180001_model_species_labels"
      ],
      "from": "immunology_sbml_kilian2024_immune_cell_dynamics_in_cue_induced_e_model2502180001_model.species_labels"
    }
  ],
  "package": "kilian2024-immune-cell-dynamics-in-cue-induced-extended",
  "runtime": {
    "duration": 10,
    "initial_inputs": {},
    "communication_step": 1
  },
  "version": "1.0.0",
  "description": "Kilian2024 - Immune cell dynamics in Cue-Induced Extended Human Colitis ModelSingle-cell technologies such as scRNA-seq and flow cytometry provide critical insights into immune cell behavior in inflam. It can be used to explore immune response dynamics and compare pathway-level behavior across conditions.",
  "schema_version": "2.0"
}